RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 FASTKQ14296 549 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 SLC26A9Q7LBE3 791 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 PIGZQ86VD9 579 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CBR4Q8N4T8 237 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 NAT16Q8N8M0 369 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 FNDC8Q8TC99 324 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 KCNN1Q92952 543 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 EXT2Q93063 718 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 FAM167AQ96KS9 214 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 NAT9Q9BTE0 207 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 C11orf84Q9BUA3 381 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 POMKQ9H5K3 350 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF385DQ9H6B1 395 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 PRMT7Q9NVM4 692 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 HOXC10Q9NYD6 342 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 A0A1W2PPW3 197 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ATE1O95260 518 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CHRM3P20309 590 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 PTPN9P43378 593 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CDK9P50750 372 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CSHL1Q14406 222 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ANO4Q32M45 955 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 OTUD1Q5VV17 481 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 REP15Q6BDI9 236 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF554Q86TJ5 538 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ZC3HC1Q86WB0 502 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 IFNEQ86WN2 208 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CARM1Q86X55 608 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ERI1Q8IV48 349 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 SLC7A14Q8TBB6 771 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CYGBQ8WWM9 190 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 C12orf43Q96C57 262 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 FBXL20Q96IG2 436 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF597Q96LX8 424 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 HAUS8Q9BT25 410 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 DUS2Q9NX74 493 aaKnown RBP10.26□□□□□ -0.77
PTPRA-203ENST00000356147 CACNA2D2Q9NY47 1150 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 SHROOM3Q8TF72 1996 aa10.26□□□□□ -0.77
PTPRA-203ENST00000356147 J3QRK9 145 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 PSMD12O00232 456 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 AP2A1O95782 977 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 CBX3Q13185 183 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 CAPRIN1Q14444 709 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 NOMO2Q5JPE7 1267 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ESRP1Q6NXG1 681 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 CENPIQ92674 756 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 DLG3Q92796 817 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 FBXL8Q96CD0 374 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ASB9Q96DX5 294 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 RANBP9Q96S59 729 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 MUC3BQ9H195 1237 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 PIF1Q9H611 641 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ASB7Q9H672 318 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 PPP1R1BQ9UD71 204 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 BCAP29Q9UHQ4 241 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 CCL22O00626 93 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 SPTLC1O15269 473 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 TIMM44O43615 452 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 GPC4O75487 556 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 CABYRO75952 493 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 TXNP10599 105 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 MCF2P10911 925 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ATP6V1B2P21281 511 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 GMPSP49915 693 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 TAS2R39P59534 338 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 RHDQ02161 417 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 PRKCQQ04759 706 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 FBXO48Q5FWF7 155 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 TTC33Q6PID6 262 aaPredicted RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 FAM35AQ86V20 835 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 SPPL2CQ8IUH8 684 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 RBM12BQ8IXT5 1001 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 IPMKQ8NFU5 416 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ISOC1Q96CN7 298 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ELMO2Q96JJ3 720 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 EIF2AQ9BY44 585 aaKnown RBP10.25□□□□□ -0.77
PTPRA-203ENST00000356147 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 SMOXQ9NWM0 555 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 ACOT9Q9Y305 439 aa10.25□□□□□ -0.77
PTPRA-203ENST00000356147 HEATR9A2RTY3 570 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 HACD1B0YJ81 288 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 MRASO14807 208 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 GIPC1O14908 333 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 C22orf31O95567 290 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 CES1P23141 567 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 LRPAP1P30533 357 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 MATKP42679 507 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 ALDH3B2P48448 385 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 GLUD2P49448 558 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 CXCR3P49682 368 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 BST2Q10589 180 aaKnown RBP10.24□□□□□ -0.77
PTPRA-203ENST00000356147 PLCL1Q15111 1095 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 NEDD8Q15843 81 aa10.24□□□□□ -0.77
PTPRA-203ENST00000356147 ZNF789Q5FWF6 425 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms