RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CPNE8Q86YQ8 564 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 NPWQ8N729 165 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 OR13H1Q8NG92 308 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 ISG20Q96AZ6 181 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 CELF6Q96J87 481 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 VCPIP1Q96JH7 1222 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 NSMCE3Q96MG7 304 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 PDFQ9HBH1 243 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 MSRB2Q9Y3D2 182 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 CEP295Q9C0D2 2601 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 IGF2RP11717 2491 aa17.01■□□□□ 0.31
PDLIM7-201ENST00000355572 J3KR12 359 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 BUB1O43683 1085 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 LRCH4O75427 683 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 MIPP30301 263 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 RGRP47804 291 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 NEK3P51956 506 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 DNAJC3Q13217 504 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 SERINC3Q13530 473 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 HNRNPDQ14103 355 aaKnown RBP17■□□□□ 0.31
PDLIM7-201ENST00000355572 TXNRD3NBQ6F5E7 133 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 ARHGAP12Q8IWW6 846 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 OR2AP1Q8NGE2 309 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 BTBD6Q96KE9 485 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 EXOC2Q96KP1 924 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 BMFQ96LC9 184 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 CCDC114Q96M63 670 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 SLC39A8Q9C0K1 460 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 ISCUQ9H1K1 167 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
PDLIM7-201ENST00000355572 LRRC19Q9H756 370 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 GDF3Q9NR23 364 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 MYO1AQ9UBC5 1043 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 ZMIZ1Q9ULJ6 1067 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 DMTF1Q9Y222 760 aa17■□□□□ 0.31
PDLIM7-201ENST00000355572 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
PDLIM7-201ENST00000355572 POM121BA6NF01 834 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 PRAMEF26H0Y7S4 382 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 TAF4O00268 1085 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 KRIT1O00522 736 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 PCDH8O95206 1070 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 GSRP00390 522 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 UGT2B4P06133 528 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 CCDC172P0C7W6 258 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 GZMAP12544 262 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 GRK6P43250 576 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 RECQLP46063 649 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 ZSCAN23Q3MJ62 389 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 SETMARQ53H47 684 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 PLPP6Q8IY26 295 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 UMODL1-AS1Q8N2C9 162 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 RYBPQ8N488 228 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 EID2Q8N6I1 236 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 ARHGEF26Q96DR7 871 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 KLHL32Q96NJ5 620 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 KLF6Q99612 283 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 PARVAQ9NVD7 372 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 IFNKQ9P0W0 207 aa16.99■□□□□ 0.31
PDLIM7-201ENST00000355572 GOLGA4Q13439 2230 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 FAM149AA5PLN7 773 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 PIGNO95427 931 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 GYPCP04921 128 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 THEGLP0DJG4 465 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 GIMD1P0DJR0 217 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 RXRGP48443 463 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 TPI1P60174 286 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 MYLK3Q32MK0 819 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 CCDC157Q569K6 752 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 NYAP1Q6ZVC0 841 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 ZSWIM9Q86XI8 627 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 KDF1Q8NAX2 398 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 EPAS1Q99814 870 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 RETREG1Q9H6L5 497 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 DYRK4Q9NR20 520 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 GPR27Q9NS67 375 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 ETNK2Q9NVF9 386 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 UCKL1Q9NWZ5 548 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 RALYQ9UKM9 306 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 NENFQ9UMX5 172 aa16.98■□□□□ 0.31
PDLIM7-201ENST00000355572 A0A087X0T9 212 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 CXorf51AA0A1B0GTR3 108 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ANKRD62A6NC57 917 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 IGLON5A6NGN9 336 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 TRIM16O95361 564 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 PAK4O96013 591 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ITGAVP06756 1048 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 FAM228BP0C875 321 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ERCC2P18074 760 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ETFBP38117 255 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 UBASH3AP57075 661 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms