RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 AGO4Q9HCK5 861 aaKnown RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 TOR4AQ9NXH8 423 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 LGALS13Q9UHV8 139 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 EME2A4GXA9 379 aaPredicted RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 IFRD1O00458 451 aaPredicted RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 NRP2O60462 931 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 LRIG2O94898 1065 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 RAB10P61026 200 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 HSF2Q03933 536 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PFKFB4Q16877 469 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 INSCQ1MX18 579 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PEG10Q86TG7 708 aaKnown RBP12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
SYNCRIP-201ENST00000355238 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 GSAPA4D1B5 854 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 MYL9P24844 172 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 YWHAZP63104 245 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC47A1Q96FL8 570 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CELF6Q96J87 481 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CIB1Q99828 191 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 MECRQ9BV79 373 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 YIPF2Q9BWQ6 316 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SMPD3Q9NY59 655 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRPM5Q9NZQ8 1165 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 AKAP7Q9P0M2 348 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.83□□□□□ -0.363e-9■■□□□ 13.2
SYNCRIP-201ENST00000355238 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 hCG_1818297A0A087WSY0 165 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 NOS1APO75052 506 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PEX11AO75192 247 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 RARRES1P49788 294 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 TMEM62Q0P6H9 643 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 DSELQ8IZU8 1212 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PTGR2Q8N8N7 351 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PDCD10Q9BUL8 212 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRKAG2Q9UGJ0 569 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SNX7Q9UNH6 387 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.368e-9■■□□□ 13.3
SYNCRIP-201ENST00000355238 DDX3YO15523 660 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 HGFP14210 728 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 POLD2P49005 469 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 NDST1P52848 882 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 IL2P60568 153 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 EGFL6Q8IUX8 553 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRDM8Q9NQV8 689 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 YWHAQP27348 245 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 GCNT7Q6ZNI0 430 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 IRF2BP2Q7Z5L9 587 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 EBF2Q9HAK2 575 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 PIDD1Q9HB75 910 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 MRPS7Q9Y2R9 242 aaKnown RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 IRGMA1A4Y4 181 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 RGS10O43665 173 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 KPNA1P52294 538 aaPredicted RBP12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CYP4F2P78329 520 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CYP4F3Q08477 520 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 ACSM2AQ08AH3 577 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 MED22Q15528 200 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 ACSM2BQ68CK6 577 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CCDC185Q8N715 623 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 MCOLN3Q8TDD5 553 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 RAB2BQ8WUD1 216 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 CLPTM1LQ96KA5 538 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRMOQ9BU70 441 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SNX15Q9NRS6 342 aa12.83□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLITRK3O94933 977 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 NTSR2O95665 410 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 NR2F6P10588 404 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC5A3P53794 718 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 TUBA3EQ6PEY2 450 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ERI1Q8IV48 349 aaKnown RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZBTB8BQ8NAP8 495 aaPredicted RBP12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC44A1Q8WWI5 657 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PLK2Q9NYY3 685 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 DSEQ9UL01 958 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PEX16Q9Y5Y5 336 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 PSMB4P28070 264 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 SEPHS1P49903 392 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 RHOAP61586 193 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 MFSD14CQ5VZR4 134 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 OOSP2Q86WS3 158 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
SYNCRIP-201ENST00000355238 CNTD1Q8N815 330 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms