RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PPHLN1Q8NEY8 458 aaKnown RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 FIBINQ8TAL6 211 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 PTCD2Q8WV60 388 aaKnown RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 DCAKDQ8WVC6 231 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ZNF669Q96BR6 464 aaPredicted RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 TIFAQ96CG3 184 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 OTUB2Q96DC9 234 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 TRIM56Q9BRZ2 755 aaKnown RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 ARNT2Q9HBZ2 717 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 IQANK1A0A1B0GTG1 560 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SLC9A3R1O14745 358 aaPredicted RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 ZMPSTE24O75844 475 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 C1QAP02745 245 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 TPH1P17752 444 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 WEE1P30291 646 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SLC12A1Q13621 1099 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 INO80DQ53TQ3 878 aaPredicted RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 PCID2Q5JVF3 399 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 FYB2Q5VWT5 728 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 DENND5AQ6IQ26 1287 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 RETSATQ6NUM9 610 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 TMEM135Q86UB9 458 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ARID3BQ8IVW6 561 aaPredicted RBP18.92■□□□□ 0.62
PTN-201ENST00000348225 TDHQ8IZJ6 230 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 CNPY4Q8N129 248 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 KIAA1958Q8N8K9 716 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTN-201ENST00000348225 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ITFG1Q8TB96 612 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 WFDC5Q8TCV5 224 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 IFT43Q96FT9 208 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ZSWIM3Q96MP5 696 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 SELENOSQ9BQE4 189 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 PSD3Q9NYI0 1048 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 ZNF180Q9UJW8 692 aa18.92■□□□□ 0.62
PTN-201ENST00000348225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.91■□□□□ 0.62
PTN-201ENST00000348225 MUSKO15146 869 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 CYTH1Q15438 398 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 LGSNQ5TDP6 509 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 TRMT10BQ6PF06 316 aaKnown RBP18.91■□□□□ 0.62
PTN-201ENST00000348225 TRABD2AQ86V40 505 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 CELF5Q8N6W0 485 aaKnown RBP18.91■□□□□ 0.62
PTN-201ENST00000348225 RIN3Q8TB24 985 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 ACDQ96AP0 544 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 ALG14Q96F25 216 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 FEM1CQ96JP0 617 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 KIFC1Q9BW19 673 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 CAPS2Q9BXY5 557 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 MRM3Q9HC36 420 aaKnown RBP18.91■□□□□ 0.62
PTN-201ENST00000348225 PPANQ9NQ55 473 aaKnown RBP18.91■□□□□ 0.62
PTN-201ENST00000348225 PLK2Q9NYY3 685 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 VPS51Q9UID3 782 aa18.91■□□□□ 0.62
PTN-201ENST00000348225 SNAP91O60641 907 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 TMCC1O94876 653 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 MGAT5Q09328 741 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 LMAN2Q12907 356 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 ANKRD20A4Q4UJ75 823 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 KDELC2Q7Z4H8 507 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 METTL3Q86U44 580 aaKnown RBP18.9■□□□□ 0.62
PTN-201ENST00000348225 SRRM1Q8IYB3 904 aaKnown RBP18.9■□□□□ 0.62
PTN-201ENST00000348225 CERS2Q96G23 380 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 NSUN3Q9H649 340 aaKnown RBP18.9■□□□□ 0.62
PTN-201ENST00000348225 IGFLR1Q9H665 355 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 SCUBE2Q9NQ36 999 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 ACTL7AQ9Y615 435 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 FAM169AQ9Y6X4 670 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 TRANK1O15050 2925 aa18.9■□□□□ 0.62
PTN-201ENST00000348225 INSIG1O15503 277 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 PIAS1O75925 651 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 PENKP01210 267 aaPredicted RBP18.89■□□□□ 0.62
PTN-201ENST00000348225 EPOP01588 193 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 HLA-DPA1P20036 260 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 FSHRP23945 695 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 SERPINH1P50454 418 aaKnown RBP18.89■□□□□ 0.62
PTN-201ENST00000348225 PLK1P53350 603 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 CBX2Q14781 532 aaPredicted RBP18.89■□□□□ 0.62
PTN-201ENST00000348225 POU6F1Q14863 301 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 TERF2Q15554 542 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 SLC1A5Q15758 541 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 RARS2Q5T160 578 aaKnown RBP18.89■□□□□ 0.62
PTN-201ENST00000348225 PKN3Q6P5Z2 889 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 MARK2Q7KZI7 788 aaKnown RBP18.89■□□□□ 0.62
PTN-201ENST00000348225 SLC25A41Q8N5S1 370 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 IRF7Q92985 503 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 NUDCD1Q96RS6 583 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 BBS2Q9BXC9 721 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 SMYD2Q9NRG4 433 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 TCAF1Q9Y4C2 921 aa18.89■□□□□ 0.62
PTN-201ENST00000348225 C2orf16Q68DN1 1984 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 CXorf51AA0A1B0GTR3 108 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 LOC285095A0A1B0GVY8 99 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 TTC24A2A3L6 582 aaPredicted RBP18.89■□□□□ 0.61
PTN-201ENST00000348225 CXorf49A8MYA2 514 aaPredicted RBP18.89■□□□□ 0.61
PTN-201ENST00000348225 RFXAPO00287 272 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 KRT37O76014 449 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 BRAFP15056 766 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 CR2P20023 1033 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 ADRA1DP25100 572 aa18.89■□□□□ 0.61
PTN-201ENST00000348225 GBP2P32456 591 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms