RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 SLC12A2P55011 1212 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 FASTKQ14296 549 aaKnown RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GK3PQ14409 553 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SMAD1Q15797 465 aaKnown RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCID2Q5JVF3 399 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CERCAMQ5T4B2 595 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TMEM198Q66K66 360 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PPP4R4Q6NUP7 873 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PRMT9Q6P2P2 845 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ZBTB49Q6ZSB9 765 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 HERC6Q8IVU3 1022 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 BBS5Q8N3I7 341 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCYOX1LQ8NBM8 494 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 KCTD4Q8WVF5 259 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 OSBPL6Q9BZF3 934 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CROTQ9UKG9 612 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 RNF11Q9Y3C5 154 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SNX13Q9Y5W8 968 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 BBIP1A8MTZ0 92 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 USP12O75317 370 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SNRPB2P08579 225 aaKnown RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 BMP2P12643 396 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ERCC2P18074 760 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TCN1P20061 433 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GMPRP36959 345 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GALNT1Q10472 559 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 NRF1Q16656 503 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SPATS1Q496A3 300 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 FBXO47Q5MNV8 452 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 REP15Q6BDI9 236 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SIX6OS1Q8N1H7 587 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 KCTD13Q8WZ19 329 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 LPGAT1Q92604 370 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ROPN1LQ96C74 230 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TCF12Q99081 682 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 RHOBTB2Q9BYZ6 727 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 MEAF6Q9HAF1 191 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ARMC1Q9NVT9 282 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 RHBDL2Q9NX52 303 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CACNA2D2Q9NY47 1150 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GTSE1Q9NYZ3 720 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCDHGB4Q9UN71 923 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCDHGB5Q9Y5G0 923 aa10.24□□□□□ -0.77
TRAPPC6B-202ENST00000347691 STX16-NPEPL1H3BU86 382 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ZBTB24O43167 697 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SBK3P0C264 359 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCSK6P29122 969 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ADRA1BP35368 520 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ACADVLP49748 655 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GMPSP49915 693 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ILF2Q12905 390 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 LRP8Q14114 963 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 INPP5AQ14642 412 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ZBED5Q49AG3 693 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 DHFR2Q86XF0 187 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CAMK1DQ8IU85 385 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 APPL2Q8NEU8 664 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PPHLN1Q8NEY8 458 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SLC2A14Q8TDB8 520 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 LRTOMTQ8WZ04 291 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 ZUFSPQ96AP4 578 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PPWD1Q96BP3 646 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 APBA2Q99767 749 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 DPEP3Q9H4B8 488 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TRPC7Q9HCX4 862 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CHRAC1Q9NRG0 131 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GDAP2Q9NXN4 497 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SH3PXD2BA1X283 911 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 C7orf72A4D263 438 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TRIM64CA6NLI5 447 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 KCNU1A8MYU2 1149 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PHGDHO43175 533 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 HTRA2O43464 458 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 NFKB1P19838 968 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SAT1P21673 171 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 MAGEA8P43361 318 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GLRBP48167 497 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 STX1BP61266 288 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 POU4F1Q01851 419 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GALNT2Q10471 571 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 KCTD2Q14681 263 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 INTS11Q5TA45 600 aaKnown RBP10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 PKN3Q6P5Z2 889 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SLC27A1Q6PCB7 646 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 GK5Q6ZS86 529 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TRIM74Q86UV6 250 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 TRIM73Q86UV7 250 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 SLC22A9Q8IVM8 553 aa10.23□□□□□ -0.77
TRAPPC6B-202ENST00000347691 CENPLQ8N0S6 344 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms