RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 BASP1P80723 227 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 SKOR1P84550 965 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 OLIG2Q13516 323 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 ACCSLQ4AC99 568 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 PREPLQ4J6C6 727 aaPredicted RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 FNDC3BQ53EP0 1204 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 RNASEH2BQ5TBB1 312 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 ZDHHC24Q6UX98 284 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 Q6ZVU0 165 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 SUGP1Q8IWZ8 645 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 KLHDC8BQ8IXV7 354 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 GJD3Q8N144 294 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 BBS5Q8N3I7 341 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 OR6K2Q8NGY2 324 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 FAM3CQ92520 227 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 TADA1Q96BN2 335 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 SNF8Q96H20 258 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 RBM15Q96T37 977 aaKnown RBP eCLIP19.27■□□□□ 0.682e-9■■□□□ 12.9
CHMP4A-201ENST00000347519 POLR1EQ9GZS1 481 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 NEUROG2Q9H2A3 272 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 NOD2Q9HC29 1040 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 MUTYHQ9UIF7 546 aa19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 FARP1Q9Y4F1 1045 aaPredicted RBP19.27■□□□□ 0.68
CHMP4A-201ENST00000347519 TMEM63AO94886 807 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 SEC31AO94979 1220 aaKnown RBP19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 PRKCHP24723 683 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 GKP32189 559 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 FDFT1P37268 417 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CD86P42081 329 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CARSP49589 748 aaKnown RBP19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 SCNN1BP51168 640 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 ITGA8P53708 1063 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 SEMA5AQ13591 1074 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 SPARCL1Q14515 664 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 KCNJ11Q14654 390 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CCDC70Q6NSX1 233 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 C4orf22Q6V702 233 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CHST14Q8NCH0 376 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CCHCR1Q8TD31 782 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 ISG20Q96AZ6 181 aaKnown RBP19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 LRRC45Q96CN5 670 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 NUDCD1Q96RS6 583 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CEP44Q9C0F1 390 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 TMEM245Q9H330 911 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 ARHGEF3Q9NR81 526 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 CACNA2D2Q9NY47 1150 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 EVLQ9UI08 416 aaPredicted RBP19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 TPX2Q9ULW0 747 aaKnown RBP19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 PLA2G4CQ9UP65 541 aa19.26■□□□□ 0.67
CHMP4A-201ENST00000347519 BNIP3LO60238 219 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 HNRNPLP14866 589 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 DRD1P21728 446 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 TIE1P35590 1138 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 WASP42768 502 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 DRG2P55039 364 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 NSUN2Q08J23 767 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 ELF2Q15723 593 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 KCTD11Q693B1 232 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 HIBCHQ6NVY1 386 aaPredicted RBP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 NCEH1Q6PIU2 408 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 KDELC1Q6UW63 502 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 SRLQ86TD4 932 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 PCDH20Q8N6Y1 951 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 PDCD7Q8N8D1 485 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 NAT8LQ8N9F0 302 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 UCMAQ8WVF2 138 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 MSANTD3Q96H12 275 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 SCUBE2Q9NQ36 999 aa19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 NDRG2Q9UN36 371 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-201ENST00000347519 TARSL2A2RTX5 802 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 CTIFO43310 598 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 GSRP00390 522 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 ECHS1P30084 290 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 HSPA9P38646 679 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 MAGEA6P43360 314 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 ST8SIA6P61647 398 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 TUBB4BP68371 445 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 GRSF1Q12849 480 aaKnown RBP eCLIP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 CARD16Q5EG05 197 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 DPY19L3Q6ZPD9 716 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 METTL3Q86U44 580 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 ZNF513Q8N8E2 541 aaPredicted RBP19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 OR2AP1Q8NGE2 309 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 OR2A12Q8NGT7 310 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 IFT81Q8WYA0 676 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 ERLEC1Q96DZ1 483 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 PWWP2AQ96N64 755 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 WHRNQ9P202 907 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 WNT16Q9UBV4 365 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 STON1Q9Y6Q2 735 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 NCOR1O75376 2440 aa19.24■□□□□ 0.67
CHMP4A-201ENST00000347519 PMPCBO75439 489 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 IGSF6O95976 241 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 APRTP07741 180 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 NNMTP40261 264 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 GRIA1P42261 906 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 CSNK1DP48730 415 aa19.23■□□□□ 0.67
CHMP4A-201ENST00000347519 CCNHP51946 323 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms