RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 C12orf29Q8N999 325 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PCYOX1LQ8NBM8 494 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ATL1Q8WXF7 558 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 OLFM3Q96PB7 478 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 VAT1Q99536 393 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ELOVL6Q9H5J4 265 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ADAM28Q9UKQ2 775 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ENTPD4Q9Y227 616 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 MAGEA13PA6NCF6 341 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 AKAP10O43572 662 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 TIMM44O43615 452 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 KRT6AP02538 564 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 KRT6BP04259 564 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CD48P09326 243 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ACADSP16219 412 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 KRT6CP48668 564 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ARRB1P49407 418 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 IRX1P78414 480 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 NDUFA9Q16795 377 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ANKRD22Q5VYY1 191 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 KCNT2Q6UVM3 1135 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CDK20Q8IZL9 346 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 WFIKKN2Q8TEU8 576 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 MIEF2Q96C03 454 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CELF6Q96J87 481 aaKnown RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SNX5Q9Y5X3 404 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PLIN4Q96Q06 1357 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 EPHX1P07099 455 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 TCF4P15884 667 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PEX5P50542 639 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SLC34A1Q06495 639 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 LYPLAL1Q5VWZ2 237 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 C16orf62Q7Z3J2 963 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF296Q8WUU4 475 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ZCWPW1Q9H0M4 648 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SUSD2Q9UGT4 822 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CDY1Q9Y6F8 540 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 MYH13Q9UKX3 1938 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 MAGEB16A2A368 324 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 NT5C1B-RDH14C9J2C7 533 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 SLC25A3Q00325 362 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 UBAP2LQ14157 1087 aaKnown RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 WASHC2DQ5SRD0 308 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ZDHHC20Q5W0Z9 365 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PTAR1Q7Z6K3 402 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 RASAL3Q86YV0 1011 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 DENND1CQ8IV53 801 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 KIAA0319LQ8IZA0 1049 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 IRF7Q92985 503 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 MCM8Q9UJA3 840 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 LRP6O75581 1613 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 M0R3G1 203 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 VPS4BO75351 444 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 FTH1P02794 183 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 IL10P22301 178 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 BLVRAP53004 296 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 NRLP54845 237 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 TAF5Q15542 800 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 FUT10Q6P4F1 479 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 GLT6D1Q7Z4J2 308 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CYP4Z1Q86W10 505 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 CXorf38Q8TB03 319 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 LPPQ93052 612 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 HSFY1Q96LI6 401 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 GTPBP2Q9BX10 602 aaKnown RBP11.01□□□□□ -0.65
CLCN6-202ENST00000346436 ING2Q9H160 280 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 IL1RAPL1Q9NZN1 696 aa11.01□□□□□ -0.65
CLCN6-202ENST00000346436 RAD51BO15315 384 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF862O60290 1169 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 RNASEH2AO75792 299 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 OR6A2O95222 327 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 FKBP9O95302 570 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 NPR3P17342 541 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 TFE3P19532 575 aaPredicted RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 GRK2P25098 689 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 DDX6P26196 483 aaKnown RBP eCLIP11□□□□□ -0.65
CLCN6-202ENST00000346436 KCNK10P57789 538 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 FAM183BPQ6ZVS7 135 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 FKBP9P1Q75LS8 142 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 MON1BQ7L1V2 547 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 CCDC185Q8N715 623 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 MRPL1Q9BYD6 325 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 RNPEPQ9H4A4 650 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 CLIC5Q9NZA1 410 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 POLR1DQ9Y2S0 133 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 HES2Q9Y543 173 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 NEMP2A6NFY4 417 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 VIPP01282 170 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 C8AP07357 584 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 CPA3P15088 417 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 DMWDQ09019 674 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 LACTB2Q53H82 288 aaPredicted RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 EEF1DP3Q658K8 133 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 TTC29Q8NA56 475 aaPredicted RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 POMGNT2Q8NAT1 580 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms