RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 SH2D3CQ8N5H7 860 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 PCDH19Q8TAB3 1148 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 NETO1Q8TDF5 533 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 TSC1Q92574 1164 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 PTPRN2Q92932 1015 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 FOXJ1Q92949 421 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 RNF157Q96PX1 679 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 OMDQ99983 421 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 FAM118BQ9BPY3 351 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 ZNF670Q9BS34 389 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 NUSAP1Q9BXS6 441 aaKnown RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 BTBD1Q9H0C5 482 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 PABPC3Q9H361 631 aaKnown RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 L2HGDHQ9H9P8 463 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 FSCN3Q9NQT6 498 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 NDFIP2Q9NV92 336 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 FBXL12Q9NXK8 326 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 PPARGC1AQ9UBK2 798 aaKnown RBP14.06□□□□□ -0.16
TPM4-202ENST00000344824 MFHAS1Q9Y4C4 1052 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 OR51B4Q9Y5P0 310 aa14.06□□□□□ -0.16
TPM4-202ENST00000344824 DNAH14Q0VDD8 3507 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 CNOT1A5YKK6 2376 aaKnown RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 LNP1A1A4G5 178 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 KRIT1O00522 736 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 RIOK3O14730 519 aaKnown RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 APOL1O14791 398 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 TJP3O95049 919 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 FSBPO95073 299 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 SEMA4FO95754 770 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 MT-CO1P00395 513 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 SRCP12931 536 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 RHOQP17081 205 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 PTPN7P35236 360 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 ACVRL1P37023 503 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 DPP6P42658 865 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 MAPK8P45983 427 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 MAPKAPK2P49137 400 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 NRG1Q02297 640 aaPredicted RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 GNA12Q03113 381 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 ZBTB16Q05516 673 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 SEMA3BQ13214 749 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 ELAVL3Q14576 367 aaKnown RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 SPDYCQ5MJ68 293 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 MANEALQ5VSG8 457 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 NPNTQ6UXI9 565 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 RFX8Q6ZV50 586 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 DSG4Q86SJ6 1040 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 NETO2Q8NC67 525 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 LRRN4CLQ8ND94 238 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 MNS1Q8NEH6 495 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 FAM71BQ8TC56 605 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 OR8D1Q8WZ84 308 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 CCDC114Q96M63 670 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 C6orf106Q9H6K1 298 aaPredicted RBP14.05□□□□□ -0.16
TPM4-202ENST00000344824 ETNK2Q9NVF9 386 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 TMEM248Q9NWD8 314 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 RNF14Q9UBS8 474 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 SERGEFQ9UGK8 458 aa14.05□□□□□ -0.16
TPM4-202ENST00000344824 ASCC3Q8N3C0 2202 aaKnown RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 CTAGE15A4D2H0 777 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 K7ERQ8 282 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 PLK4O00444 970 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 ATP9BO43861 1147 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 RAMP2O60895 175 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 MAP3K6O95382 1288 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 ADH1BP00325 375 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 CTAGE8P0CG41 777 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 SLC8A1P32418 973 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 RECQLP46063 649 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 ATXN3P54252 364 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 TFDP2Q14188 446 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.162e-6■■□□□ 13.8
TPM4-202ENST00000344824 TAZQ16635 292 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 RETSATQ6NUM9 610 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 LEKR1Q6ZMV7 388 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 DGLUCYQ7Z3D6 616 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 CTAGE6Q86UF2 777 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 CTAGE4Q8IX94 777 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 HDDC3Q8N4P3 179 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 CEP112Q8N8E3 955 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 GRIN3AQ8TCU5 1115 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 FRS2Q8WU20 508 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 C1orf54Q8WWF1 131 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 ATG4AQ8WYN0 398 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 FAF2Q96CS3 445 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 GTPBP2Q9BX10 602 aaKnown RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 TNKS2Q9H2K2 1166 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 SAE1Q9UBE0 346 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 ZNF212Q9UDV6 495 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 PILRBQ9UKJ0 227 aa14.04□□□□□ -0.16
TPM4-202ENST00000344824 TTC7AQ9ULT0 858 aaPredicted RBP14.04□□□□□ -0.16
TPM4-202ENST00000344824 NEU3Q9UQ49 428 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms