RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 OXCT1P55809 520 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 PDE1BQ01064 536 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 ESRP1Q6NXG1 681 aaKnown RBP20.25■□□□□ 0.83
RTN1-202ENST00000342503 GRAMD1AQ96CP6 724 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 SEMA3CQ99985 751 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 POLR1EQ9GZS1 481 aaKnown RBP20.25■□□□□ 0.83
RTN1-202ENST00000342503 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 CPQQ9Y646 472 aa20.25■□□□□ 0.83
RTN1-202ENST00000342503 LCHNA4D1U4 455 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 EDF1O60869 148 aaKnown RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 KIAA0754O94854 1291 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 CSPG5O95196 566 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 LATS1O95835 1130 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 ADH1AP07327 375 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 GLDCP23378 1020 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 ERVFC1P60507 584 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 ZXDBP98169 803 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SEPT6Q14141 434 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 RNF187Q5TA31 235 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 CCDC149Q6ZUS6 474 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 GAREM2Q75VX8 874 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SETD3Q86TU7 594 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 TMC8Q8IU68 726 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SP7Q8TDD2 431 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 RAD9AQ99638 391 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 LRRC3Q9BY71 257 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 MANSC1Q9H8J5 431 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SLC2A6Q9UGQ3 507 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 MTCL1Q9Y4B5 1905 aaKnown RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 GREM1O60565 184 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 C8AP07357 584 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SERPINB4P48594 390 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 SERPINH1P50454 418 aaKnown RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 LIMK2P53671 638 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 CSE1LP55060 971 aaKnown RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 PDE1CQ14123 709 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 PSRC1Q6PGN9 363 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 CNPY4Q8N129 248 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 DCLK2Q8N568 766 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 KREMEN2Q8NCW0 462 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 ARMC2Q8NEN0 867 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 PTPRN2Q92932 1015 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 ATXN7L3BQ96GX2 97 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 TCF25Q9BQ70 676 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 UBA2Q9UBT2 640 aaPredicted RBP20.24■□□□□ 0.83
RTN1-202ENST00000342503 TBC1D30Q9Y2I9 924 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 STARD13Q9Y3M8 1113 aa20.24■□□□□ 0.83
RTN1-202ENST00000342503 LOC285095A0A1B0GVY8 99 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 TOP3BO95985 862 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 HSPA1AP0DMV8 641 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 HSPA1BP0DMV9 641 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 CTNNB1P35222 781 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 ABCG1P45844 678 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 MSLNQ13421 630 aaPredicted RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 SIRPB2Q5JXA9 342 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 RNF219Q5W0B1 726 aaPredicted RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 CXorf57Q6NSI4 855 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 BBS5Q8N3I7 341 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 MRPS31Q92665 395 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 ATP2A3Q93084 1043 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 RANBP9Q96S59 729 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 MCMBPQ9BTE3 642 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 EMILIN2Q9BXX0 1053 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 ACE2Q9BYF1 805 aaPredicted RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 TREX1Q9NSU2 369 aa20.23■□□□□ 0.83
RTN1-202ENST00000342503 MTO1Q9Y2Z2 717 aaKnown RBP20.23■□□□□ 0.83
RTN1-202ENST00000342503 TLL1O43897 1013 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 TBL1XO60907 577 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 VAPBO95292 243 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 BGNP21810 368 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ARCN1P48444 511 aaKnown RBP20.22■□□□□ 0.83
RTN1-202ENST00000342503 PLPP4Q5VZY2 271 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 FSTL4Q6MZW2 842 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 Q6ZNB5 142 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 MAB21L3Q8N8X9 362 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ISL2Q96A47 359 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 CINPQ9BW66 212 aaPredicted RBP20.22■□□□□ 0.83
RTN1-202ENST00000342503 PRKD2Q9BZL6 878 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 SNX15Q9NRS6 342 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 NSMCE4AQ9NXX6 385 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 SEPT3Q9UH03 358 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 HEATR9A2RTY3 570 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 CCT8L1PA6NM43 557 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 NRG2O14511 850 aaPredicted RBP20.22■□□□□ 0.83
RTN1-202ENST00000342503 ATXN1LP0C7T5 689 aaKnown RBP20.22■□□□□ 0.83
RTN1-202ENST00000342503 NEFHP12036 1026 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ARNTP27540 789 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 TYK2P29597 1187 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 BMPR1AP36894 532 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 MAGEA12P43365 314 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 SERPINB8P50452 374 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 CNGA3Q16281 694 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ARMC3Q5W041 872 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ALG1LQ6GMV1 187 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 CCDC121Q6ZUS5 278 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 OTOAQ7RTW8 1153 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms