RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FTHL17Q9BXU8 183 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 ZMYM5Q9UJ78 669 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 TRHDEQ9UKU6 1024 aa12.57□□□□□ -0.4
SNRNP48-201ENST00000342415 RRN3P2A6NIE6 340 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 A8MX80 341 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 TRIM38O00635 465 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 CABYRO75952 493 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 FMO4P31512 558 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ESAMQ96AP7 390 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 CCDC126Q96EE4 140 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ACOX2Q99424 681 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 RBBP8Q99708 897 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 TDRKHQ9Y2W6 561 aaKnown RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 GON4LQ3T8J9 2241 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ADCY6O43306 1168 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 GCATO75600 419 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 HDCP19113 662 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ATP5F1P24539 256 aaPredicted RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ZNF618Q5T7W0 954 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 C15orf39Q6ZRI6 1047 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 RELL1Q8IUW5 271 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 TP53INP2Q8IXH6 220 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 FBXO30Q8TB52 745 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 SNX19Q92543 992 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 QKIQ96PU8 341 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 RERGLQ9H628 205 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 SPAG4Q9NPE6 437 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 HPS4Q9NQG7 708 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 STX7O15400 261 aaKnown RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 MGEA5O60502 916 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 SYNCRIPO60506 623 aaKnown RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ZBTB11O95625 1053 aaPredicted RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 EDN1P05305 212 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 CRABP2P29373 138 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 SCNN1GP51170 649 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 LIMK2P53671 638 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ITGADQ13349 1161 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 VPS26BQ4G0F5 336 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 LBX2Q6XYB7 198 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 UBR7Q8N806 425 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 FAR2Q96K12 515 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 CEP19Q96LK0 163 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 XYLT2Q9H1B5 865 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 ARMC7Q9H6L4 198 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 TMEM165Q9HC07 324 aa12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 PNMA8BQ9ULN7 279 aaPredicted RBP12.56□□□□□ -0.4
SNRNP48-201ENST00000342415 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 CLK1P49759 484 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 NADK2Q4G0N4 442 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 NSMCE2Q96MF7 247 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 COQ10BQ9H8M1 238 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ADAMTS6Q9UKP5 1117 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TIMM22Q9Y584 194 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ALDOAP04075 364 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 THPOP40225 353 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TAS2R39P59534 338 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TEX44Q53QW1 395 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 LDLRAP1Q5SW96 308 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 NT5DC4Q86YG4 428 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ARFGAP1Q8N6T3 406 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 GLMNQ92990 594 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 GPR63Q9BZJ6 419 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 MUC3BQ9H195 1237 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 MROH8Q9H579 483 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 TRMT6Q9UJA5 497 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 KNL1Q8NG31 2342 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SMIM28A0A1B0GU29 152 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SLC12A8A0AV02 714 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 BTN3A1O00481 513 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 MDM4O15151 490 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 SOAT2O75908 522 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 CRTAMO95727 393 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 LDLRP01130 860 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 B3GNT9Q6UX72 402 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PLPPR4Q7Z2D5 763 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 PIWIL4Q7Z3Z4 852 aaKnown RBP12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 FAM126BQ8IXS8 530 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 ABCG8Q9H221 673 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 RHOJQ9H4E5 214 aa12.55□□□□□ -0.4
SNRNP48-201ENST00000342415 GBA2Q9HCG7 927 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms