RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ZNF460Q14592 562 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 USP10Q14694 798 aaKnown RBP20.37■□□□□ 0.85
SPG7-202ENST00000341316 IZUMO2Q6UXV1 221 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 RAPH1Q70E73 1250 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SLC41A1Q8IVJ1 513 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SPNS2Q8IVW8 549 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 GATA5Q9BWX5 397 aaPredicted RBP20.37■□□□□ 0.85
SPG7-202ENST00000341316 NDE1Q9NXR1 346 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SCML2Q9UQR0 700 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 ARHGEF37A1IGU5 675 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 BAG2O95816 211 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 PEX11BO96011 259 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SLC35E2BP0CK96 405 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 DNAJB2P25686 324 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 GLRBP48167 497 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 ACLYP53396 1101 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 AP2B1P63010 937 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 FOXB2Q5VYV0 432 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SLC30A9Q6PML9 568 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 RANBP10Q6VN20 620 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 TFAP2DQ7Z6R9 452 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 CNTN4Q8IWV2 1026 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 ZNF683Q8IZ20 524 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 PCSK9Q8NBP7 692 aaKnown RBP20.37■□□□□ 0.85
SPG7-202ENST00000341316 AGR3Q8TD06 166 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SLC39A13Q96H72 371 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SERPINB11Q96P15 392 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 TASP1Q9H6P5 420 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 TBC1D13Q9NVG8 400 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 IPO11Q9UI26 975 aaKnown RBP20.37■□□□□ 0.85
SPG7-202ENST00000341316 PPM1HQ9ULR3 514 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 SORCS3Q9UPU3 1222 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 TCAF1Q9Y4C2 921 aa20.37■□□□□ 0.85
SPG7-202ENST00000341316 MYLKQ15746 1914 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 MYO16Q9Y6X6 1858 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 TRIM13O60858 407 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 HSPA4LO95757 839 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 UBTFL6P0CB48 400 aaPredicted RBP20.36■□□□□ 0.85
SPG7-202ENST00000341316 CCR10P46092 362 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 GEMP55040 296 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 CNGA3Q16281 694 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 SLC24A5Q71RS6 500 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 MON1AQ86VX9 555 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 CEP97Q8IW35 865 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 CENPLQ8N0S6 344 aaPredicted RBP20.36■□□□□ 0.85
SPG7-202ENST00000341316 NUP93Q8N1F7 819 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 MAPK15Q8TD08 544 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 KCTD4Q8WVF5 259 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 ACE2Q9BYF1 805 aaPredicted RBP20.36■□□□□ 0.85
SPG7-202ENST00000341316 CDH19Q9H159 772 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 C1orf21Q9H246 121 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 COG4Q9H9E3 785 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 MAN1C1Q9NR34 630 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 OXSMQ9NWU1 459 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 GMIPQ9P107 970 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 TLR6Q9Y2C9 796 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 SOAT2O75908 522 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 TBX18O95935 607 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 CHRNGP07510 517 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 PPHLN1Q8NEY8 458 aaKnown RBP20.36■□□□□ 0.85
SPG7-202ENST00000341316 B3GALT6Q96L58 329 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 PAPOLBQ9NRJ5 636 aaKnown RBP20.36■□□□□ 0.85
SPG7-202ENST00000341316 TLK1Q9UKI8 766 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 SQORQ9Y6N5 450 aa20.36■□□□□ 0.85
SPG7-202ENST00000341316 FRMPD3Q5JV73 1810 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 A0A088AWK7 358 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 CNTN5O94779 1100 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 EOMESO95936 686 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 SLC25A3Q00325 362 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 NRG1Q02297 640 aaPredicted RBP20.35■□□□□ 0.85
SPG7-202ENST00000341316 DSG1Q02413 1049 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 IHHQ14623 411 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 PCSK7Q16549 785 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 SLC9B1Q4ZJI4 515 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 ALFQ53S48 1182 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 SPATA6LQ8N4H0 392 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 ATAD1Q8NBU5 361 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 FSD1LQ9BXM9 530 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 SHCBP1LQ9BZQ2 653 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 GPAMQ9HCL2 828 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 ENTPD7Q9NQZ7 604 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 TREX1Q9NSU2 369 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 NSMCE4AQ9NXX6 385 aa20.35■□□□□ 0.85
SPG7-202ENST00000341316 FNDC1Q4ZHG4 1894 aaPredicted RBP20.35■□□□□ 0.85
SPG7-202ENST00000341316 WASH4PA8MWX3 477 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 J3KR12 359 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 CLGNO14967 610 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 HAPLN1P10915 354 aaPredicted RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 SLC1A2P43004 574 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 GSTA3Q16772 222 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 VARS2Q5ST30 1063 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 TIGD7Q6NT04 549 aaPredicted RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 MSANTD2Q6P1R3 559 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 POTEHQ6S545 545 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 EPGNQ6UW88 154 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 DCP1BQ8IZD4 617 aaKnown RBP20.34■□□□□ 0.85
SPG7-202ENST00000341316 PHTF2Q8N3S3 785 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 C1orf74Q96LT6 269 aa20.34■□□□□ 0.85
SPG7-202ENST00000341316 ECSITQ9BQ95 431 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms