RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ARSIQ5FYB1 569 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 PIP5KL1Q5T9C9 394 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 KIAA0895LQ68EN5 471 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 NCEH1Q6PIU2 408 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 NAXDQ8IW45 347 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 TP53INP2Q8IXH6 220 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ZCCHC9Q8N567 271 aaKnown RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 NETO2Q8NC67 525 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 OR2T34Q8NGX1 318 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 SLC35G2Q8TBE7 412 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ADAMTS14Q8WXS8 1223 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ARRDC3Q96B67 414 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 CSPG4P5Q96PW8 444 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 TM6SF2Q9BZW4 377 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 EBF2Q9HAK2 575 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 DONSONQ9NYP3 566 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 IL36AQ9UHA7 158 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
VAPA-201ENST00000340541 KNL1Q8NG31 2342 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 ZZEF1O43149 2961 aa15.66■□□□□ 0.1
VAPA-201ENST00000340541 FAM208BQ5VWN6 2430 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 AKAP13Q12802 2813 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 DOCK9Q9BZ29 2069 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 FAM47DPA6NHR8 397 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 SRRM3A6NNA2 597 aaPredicted RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 H3BRJ5 948 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 J3KR12 359 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 DAPK3O43293 454 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 PLRG1O43660 514 aaKnown RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 PRAMEF11O60813 436 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 LEFTY1O75610 366 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 TMCC1O94876 653 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 CER1O95813 267 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 GSRP00390 522 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 PRNPP04156 253 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 AMPD1P23109 780 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 MAN1A1P33908 653 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 RECQLP46063 649 aaPredicted RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 PAPOLAP51003 745 aaKnown RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 TCEAL1Q15170 157 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 ATP13A4Q4VNC1 1196 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 INO80DQ53TQ3 878 aaPredicted RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 DBX2Q6ZNG2 339 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 CHCHD4Q8N4Q1 142 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 OR2AP1Q8NGE2 309 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 OR2I1PQ8NGU4 316 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 OR14C36Q8NHC7 312 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 GRIN3AQ8TCU5 1115 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 CASKIN2Q8WXE0 1202 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 ZCCHC14Q8WYQ9 949 aaKnown RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 MIR1-1HGQ9H1L0 117 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 ETNK2Q9NVF9 386 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 KLK13Q9UKR3 277 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 INTUQ9ULD6 942 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 APOBEC2Q9Y235 224 aaKnown RBP15.65■□□□□ 0.1
VAPA-201ENST00000340541 PCDHGB2Q9Y5G2 931 aa15.65■□□□□ 0.1
VAPA-201ENST00000340541 LRRC72A6NJI9 287 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 KPNA3O00505 521 aaPredicted RBP15.64■□□□□ 0.09
VAPA-201ENST00000340541 CBFA2T3O75081 653 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 FSBPO95073 299 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 CD48P09326 243 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 IGF2RP11717 2491 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 CD27P26842 260 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 GKP32189 559 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 ARL4AP40617 200 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 DNA2P51530 1060 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 CCR5P51681 352 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 PPP2CBP62714 309 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 PPP2CAP67775 309 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 BNC1Q01954 994 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 CYTH1Q15438 398 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 ATXN7L2Q5T6C5 722 aaPredicted RBP15.64■□□□□ 0.09
VAPA-201ENST00000340541 ARHGAP36Q6ZRI8 547 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 ZNF354CQ86Y25 554 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 OR6K2Q8NGY2 324 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 RFFLQ8WZ73 363 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 SNX19Q92543 992 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 PANX2Q96RD6 677 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 LHX3Q9UBR4 397 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 LCMT1Q9UIC8 334 aa15.64■□□□□ 0.09
VAPA-201ENST00000340541 ASPMQ8IZT6 3477 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 ARHGAP42A6NI28 874 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 LATO43561 262 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 AFF3P51826 1226 aaKnown RBP15.63■□□□□ 0.09
VAPA-201ENST00000340541 CDH6P55285 790 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 MMRN1Q13201 1228 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 MESDQ14696 234 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 SUZ12Q15022 739 aaKnown RBP15.63■□□□□ 0.09
VAPA-201ENST00000340541 HADHQ16836 314 aaKnown RBP15.63■□□□□ 0.09
VAPA-201ENST00000340541 MYLK3Q32MK0 819 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 RHOT2Q8IXI1 618 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 CAMK1GQ96NX5 476 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 CDC6Q99741 560 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 HDAC8Q9BY41 377 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 KDM4CQ9H3R0 1056 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 GAREM1Q9H706 876 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 TM9SF3Q9HD45 589 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms