RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 ZYG11AQ6WRX3 759 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 CDCA5Q96FF9 252 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 FBRSL1Q9HCM7 1045 aaKnown RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 ADAM28Q9UKQ2 775 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 FNDC3AQ9Y2H6 1198 aaKnown RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 FAM149AA5PLN7 773 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF839A8K0R7 811 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 AKAP10O43572 662 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 CD4P01730 458 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 SMPD1P17405 629 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 MAXP61244 160 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 LSAMPQ13449 338 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 NAB1Q13506 487 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 DPYSQ14117 519 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 KIF19Q2TAC6 998 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 RBM20Q5T481 1227 aaKnown RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 HEXDCQ8WVB3 486 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TMIGD2Q96BF3 282 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TMEM79Q9BSE2 394 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 ZDHHC7Q9NXF8 308 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 SHROOM3Q8TF72 1996 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 A0A0G2JLL6 359 aaPredicted RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TIPRLO75663 272 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 PGK1P00558 417 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 PSMC3P17980 439 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 NAPEPLDQ6IQ20 393 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 PRRT2Q7Z6L0 340 aaPredicted RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF512Q96ME7 567 aaPredicted RBP14.57□□□□□ -0.08
CPSF7-201ENST00000340437 IL22Q9GZX6 179 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 PIF1Q9H611 641 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 SPON1Q9HCB6 807 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 PREBQ9HCU5 417 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 CASS4Q9NQ75 786 aa14.57□□□□□ -0.08
CPSF7-201ENST00000340437 TOMM70O94826 608 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SUPT7LO94864 414 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SBK3P0C264 359 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 YWHAQP27348 245 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SV2CQ496J9 727 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 ZNF789Q5FWF6 425 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 PIGGQ5H8A4 983 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 CENPLQ8N0S6 344 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 CNTD1Q8N815 330 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 TXNDC5Q8NBS9 432 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 GBA3Q9H227 469 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 MID2Q9UJV3 735 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 DNAJC25-GNG10A0A024R161 153 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 ARHGEF37A1IGU5 675 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 MSI1O43347 362 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 CABYRO75952 493 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 FYNP06241 537 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SMIM18P0DKX4 95 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 PLOD1Q02809 727 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 FASTKQ14296 549 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 PAFAH1B3Q15102 231 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 LSMEM2Q8N112 164 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 PPTC7Q8NI37 304 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 LPGAT1Q92604 370 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 RPL10LQ96L21 214 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 DNAI2Q9GZS0 605 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 RHOJQ9H4E5 214 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 TMEM30AQ9NV96 361 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 MPP6Q9NZW5 540 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 EGFL7Q9UHF1 273 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 BCAP29Q9UHQ4 241 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 MTF2Q9Y483 593 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 AP4S1Q9Y587 144 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 LCTP09848 1927 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 DOCK1Q14185 1865 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 ALOX15P16050 662 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 UGT1A6P19224 532 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SLC1A2P43004 574 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 HABP4Q5JVS0 413 aaKnown RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 METTL21CQ5VZV1 264 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 ATPAF2Q8N5M1 289 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 FAM110BQ8TC76 370 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 ARHGEF38Q9NXL2 777 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 SFMBT1Q9UHJ3 866 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 RGPD3A6NKT7 1758 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-201ENST00000340437 RGPD4Q7Z3J3 1758 aa14.56□□□□□ -0.08
CPSF7-201ENST00000340437 TNFAIP8O95379 198 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 KCNA5P22460 613 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 BDNFP23560 247 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 NPY2RP49146 381 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 INHBCP55103 352 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 RAB10P61026 200 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 ANKRD13AQ8IZ07 590 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PGAM4Q8N0Y7 254 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PCED1BQ96HM7 432 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 SENP8Q96LD8 212 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 RBM22Q9NW64 420 aaKnown RBP eCLIP14.55□□□□□ -0.081e-6■■■■□ 23.9
CPSF7-201ENST00000340437 NCKIPSDQ9NZQ3 722 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 DSEQ9UL01 958 aa14.55□□□□□ -0.08
CPSF7-201ENST00000340437 PRPF19Q9UMS4 504 aaKnown RBP14.55□□□□□ -0.08
CPSF7-201ENST00000340437 CRYL1Q9Y2S2 319 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms