RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 hCG_1818297A0A087WSY0 165 aa8.78□□□□□ -1
RTN3-202ENST00000339997 DHRS12A0PJE2 317 aa8.78□□□□□ -1
RTN3-202ENST00000339997 RAMP2O60895 175 aa8.78□□□□□ -1
RTN3-202ENST00000339997 TMCC2O75069 709 aa8.78□□□□□ -1
RTN3-202ENST00000339997 ALDH1A1P00352 501 aa8.78□□□□□ -1
RTN3-202ENST00000339997 CST1P01037 141 aa8.78□□□□□ -1
RTN3-202ENST00000339997 SLC2A3P11169 496 aa8.78□□□□□ -1
RTN3-202ENST00000339997 MUTP22033 750 aa8.78□□□□□ -1
RTN3-202ENST00000339997 GUCA1AP43080 201 aaPredicted RBP8.78□□□□□ -1
RTN3-202ENST00000339997 CRATP43155 626 aa8.78□□□□□ -1
RTN3-202ENST00000339997 COX10Q12887 443 aa8.78□□□□□ -1
RTN3-202ENST00000339997 EPS8Q12929 822 aa8.78□□□□□ -1
RTN3-202ENST00000339997 MED22Q15528 200 aa8.78□□□□□ -1
RTN3-202ENST00000339997 KYAT1Q16773 422 aa8.78□□□□□ -1
RTN3-202ENST00000339997 RFX4Q33E94 735 aa8.78□□□□□ -1
RTN3-202ENST00000339997 CLEC6AQ6EIG7 209 aa8.78□□□□□ -1
RTN3-202ENST00000339997 RD3Q7Z3Z2 195 aa8.78□□□□□ -1
RTN3-202ENST00000339997 ZNF605Q86T29 641 aa8.78□□□□□ -1
RTN3-202ENST00000339997 FBXL16Q8N461 479 aa8.78□□□□□ -1
RTN3-202ENST00000339997 FAR1Q8WVX9 515 aa8.78□□□□□ -1
RTN3-202ENST00000339997 RELTQ969Z4 430 aa8.78□□□□□ -1
RTN3-202ENST00000339997 RNF157Q96PX1 679 aa8.78□□□□□ -1
RTN3-202ENST00000339997 ADGRE3Q9BY15 652 aa8.78□□□□□ -1
RTN3-202ENST00000339997 SPAG4Q9NPE6 437 aa8.78□□□□□ -1
RTN3-202ENST00000339997 TMLHEQ9NVH6 421 aa8.78□□□□□ -1
RTN3-202ENST00000339997 CDH9Q9ULB4 789 aa8.78□□□□□ -1
RTN3-202ENST00000339997 FRMPD4Q14CM0 1322 aa8.78□□□□□ -1
RTN3-202ENST00000339997 UMODL1Q5DID0 1318 aa8.78□□□□□ -1
RTN3-202ENST00000339997 KCNU1A8MYU2 1149 aa8.77□□□□□ -1
RTN3-202ENST00000339997 C19orf81C9J6K1 198 aa8.77□□□□□ -1
RTN3-202ENST00000339997 TBX10O75333 385 aa8.77□□□□□ -1
RTN3-202ENST00000339997 F9P00740 461 aa8.77□□□□□ -1
RTN3-202ENST00000339997 AMHP03971 560 aa8.77□□□□□ -1
RTN3-202ENST00000339997 C2P06681 752 aa8.77□□□□□ -1
RTN3-202ENST00000339997 THP07101 528 aa8.77□□□□□ -1
RTN3-202ENST00000339997 RHOCP08134 193 aa8.77□□□□□ -1
RTN3-202ENST00000339997 MBL2P11226 248 aaPredicted RBP8.77□□□□□ -1
RTN3-202ENST00000339997 EFNA1P20827 205 aaPredicted RBP8.77□□□□□ -1
RTN3-202ENST00000339997 S100A3P33764 101 aa8.77□□□□□ -1
RTN3-202ENST00000339997 SLC5A3P53794 718 aa8.77□□□□□ -1
RTN3-202ENST00000339997 BACE1P56817 501 aa8.77□□□□□ -1
RTN3-202ENST00000339997 UGCGQ16739 394 aa8.77□□□□□ -1
RTN3-202ENST00000339997 HIST2H2ACQ16777 129 aaPredicted RBP8.77□□□□□ -1
RTN3-202ENST00000339997 USP39Q53GS9 565 aaKnown RBP8.77□□□□□ -1
RTN3-202ENST00000339997 HIST2H2AA3Q6FI13 130 aa8.77□□□□□ -1
RTN3-202ENST00000339997 GALNT18Q6P9A2 607 aa8.77□□□□□ -1
RTN3-202ENST00000339997 CASP12Q6UXS9 341 aa8.77□□□□□ -1
RTN3-202ENST00000339997 TRMT11Q7Z4G4 463 aaKnown RBP8.77□□□□□ -1
RTN3-202ENST00000339997 SFRP1Q8N474 314 aa8.77□□□□□ -1
RTN3-202ENST00000339997 DPP10Q8N608 796 aa8.77□□□□□ -1
RTN3-202ENST00000339997 ATP6V0D2Q8N8Y2 350 aa8.77□□□□□ -1
RTN3-202ENST00000339997 GPR156Q8NFN8 814 aa8.77□□□□□ -1
RTN3-202ENST00000339997 KLHL5Q96PQ7 755 aa8.77□□□□□ -1
RTN3-202ENST00000339997 MRPL45Q9BRJ2 306 aaKnown RBP8.77□□□□□ -1
RTN3-202ENST00000339997 STN1Q9H668 368 aaKnown RBP8.77□□□□□ -1
RTN3-202ENST00000339997 ZNF358Q9NW07 568 aa8.77□□□□□ -1
RTN3-202ENST00000339997 GMPPBQ9Y5P6 360 aa8.77□□□□□ -1
RTN3-202ENST00000339997 FMN2Q9NZ56 1722 aa8.77□□□□□ -1
RTN3-202ENST00000339997 ZMYM2Q9UBW7 1377 aa8.77□□□□□ -1
RTN3-202ENST00000339997 OVOS2A0A0J9YW53 1432 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 OVOS2Q6IE36 1432 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 DLC1Q96QB1 1528 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 IQCF5A8MTL0 148 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 ALOX15BO15296 676 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 IDH3BO43837 385 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 TRMUO75648 421 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 SERPINA6P08185 405 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 ITGB5P18084 799 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 YAP1P46937 504 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 SLC11A2P49281 568 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 RPL38P63173 70 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 CNTN1Q12860 1018 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 TAB1Q15750 504 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 CWF19L1Q69YN2 538 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 SLC22A9Q8IVM8 553 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 HERC6Q8IVU3 1022 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 DCP1BQ8IZD4 617 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 TP53INP1Q96A56 240 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 COL26A1Q96A83 441 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 REXO5Q96IC2 774 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 MAML3Q96JK9 1138 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 FEM1CQ96JP0 617 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 EBNA1BP2Q99848 306 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 TINF2Q9BSI4 451 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 PRKAG3Q9UGI9 489 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 ZNF112Q9UJU3 913 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 BPTFQ12830 3046 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 ANKRD12Q6UB98 2062 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 CCL15-CCL14A0A0B4J2E2 113 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 CYP1A2P05177 515 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 DARSP14868 501 aaKnown RBP8.77□□□□□ -1.01
RTN3-202ENST00000339997 DPEP1P16444 411 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 CKMT2P17540 419 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 LBPP18428 481 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 ITGALP20701 1170 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 C4BPBP20851 252 aa8.77□□□□□ -1.01
RTN3-202ENST00000339997 TNFRSF8P28908 595 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms