RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 ACTRT2Q8TDY3 377 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 NRG4Q8WWG1 115 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 SREK1Q8WXA9 508 aaKnown RBP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 TFAP2BQ92481 460 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 CDKL2Q92772 493 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 AZIN2Q96A70 460 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 UROC1Q96N76 676 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 TSPAN18Q96SJ8 248 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 ECSITQ9BQ95 431 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 CENPKQ9BS16 269 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 ZNF670Q9BS34 389 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 MTMR12Q9C0I1 747 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 CRISPLD1Q9H336 500 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 SUDS3Q9H7L9 328 aaPredicted RBP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 ZWILCHQ9H900 591 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 S100A14Q9HCY8 104 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 ETNK2Q9NVF9 386 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 DNAJC28Q9NX36 388 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 NDE1Q9NXR1 346 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 DPP3Q9NY33 737 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 PLK2Q9NYY3 685 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 PPARGC1AQ9UBK2 798 aaKnown RBP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 SIX4Q9UIU6 781 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 VPS28Q9UK41 221 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 BARX2Q9UMQ3 279 aaPredicted RBP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 CHMP2BQ9UQN3 213 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 DERAQ9Y315 318 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 TTLL3Q9Y4R7 772 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 IRAK3Q9Y616 596 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 COMMD3-BMI1R4GMX3 469 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 VCANP13611 3396 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 SF3B1O75533 1304 aaKnown RBP eCLIP6.47□□□□□ -1.37
ZNF28-201ENST00000339844 SCN1AP35498 2009 aa6.47□□□□□ -1.37
ZNF28-201ENST00000339844 C5orf42Q9H799 3197 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 MAGEB16A2A368 324 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 H0Y3Z8 333 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 H3BQ06 376 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 AP3B1O00203 1094 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PIRO00625 290 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 APOL1O14791 398 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CASQ2O14958 399 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 HGSO14964 777 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 TEX28O15482 410 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ADAM12O43184 909 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 NDUFB5O43674 189 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CILPO75339 1184 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 SKAP2O75563 359 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 MICAL2O94851 1124 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 RTN3O95197 1032 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ITGB3P05106 788 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 SERPINE1P05121 402 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 URODP06132 367 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PDHA1P08559 390 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 FAM163BP0C2L3 166 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PABPC4LP0CB38 370 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 UQCRBP14927 111 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CD19P15391 556 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PDGFRAP16234 1089 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 EPCAMP16422 314 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 FGFR3P22607 806 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CPOXP36551 454 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 GARSP41250 739 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PTPN9P43378 593 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ASPAP45381 313 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 HARS2P49590 506 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CDH6P55285 790 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 YWHAZP63104 245 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 INCA1Q0VD86 236 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ADAM15Q13444 863 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 MED21Q13503 144 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 SEMA5AQ13591 1074 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 GRM2Q14416 872 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 USP41Q3LFD5 358 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CCDC153Q494R4 210 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 HSF5Q4G112 596 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 HP1BP3Q5SSJ5 553 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 GRTP1Q5TC63 336 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 FAXCQ5TGI0 409 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ARMC3Q5W041 872 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ZFP1Q6P2D0 407 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 RSPO2Q6UXX9 243 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 EP400NLQ6ZTU2 488 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ACAD11Q709F0 780 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 TMEM110Q86TL2 294 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 SETD3Q86TU7 594 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 NLRP8Q86W28 1048 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ULK2Q8IYT8 1036 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 ST13P4Q8IZP2 240 aaPredicted RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 CCDC33Q8N5R6 958 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 EFHBQ8N7U6 833 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PPM1NQ8N819 430 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 RBM15BQ8NDT2 890 aaKnown RBP6.46□□□□□ -1.38
ZNF28-201ENST00000339844 OR6Y1Q8NGX8 325 aa6.46□□□□□ -1.38
ZNF28-201ENST00000339844 PPP4R1Q8TF05 950 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms