RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PROSCO94903 275 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 KCNK2O95069 426 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CALCAP01258 141 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 JUNBP17275 347 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CTRB1P17538 263 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CRHR1P34998 444 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PTPN7P35236 360 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TMBIM6P55061 237 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MYL7Q01449 175 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 DNASE1L3Q13609 305 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SLC36A3Q495N2 470 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PDPK2PQ6A1A2 396 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 IQSEC1Q6DN90 963 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CTRB2Q6GPI1 263 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF598Q86UK7 904 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SLC9A9Q8IVB4 645 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MCOLN2Q8IZK6 566 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MFSD2AQ8NA29 543 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 FAM47BQ8NA70 645 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 MAPK15Q8TD08 544 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 ATP6V1E2Q96A05 226 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CMTM5Q96DZ9 223 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 CNDP1Q96KN2 507 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 LENG8Q96PV6 779 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 KCNK16Q96T55 309 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 DHRS9Q9BPW9 319 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TUBA1CQ9BQE3 449 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TRIM56Q9BRZ2 755 aaKnown RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 APOL6Q9BWW8 343 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 SEZ6LQ9BYH1 1024 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 RAB34Q9BZG1 259 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM117Q9H0C3 514 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PARVGQ9HBI0 331 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PCDH9Q9HC56 1237 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PTPRHQ9HD43 1115 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 AVENQ9NQS1 362 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TLR9Q9NR96 1032 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 AGPAT3Q9NRZ7 376 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 TCEAL9Q9UHQ7 104 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 DAPK2Q9UIK4 370 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 VWA7Q9Y334 891 aa5.67□□□□□ -1.5
CSDE1-202ENST00000339438 PCDH15Q96QU1 1955 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 A0A0G2JMP0 313 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 LOC100653049A0A140TA62 436 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ILVBLA1L0T0 632 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MOXD2PA6NHM9 499 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 KRT34O76011 436 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 KRT18P05783 430 aaKnown RBP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MYL4P12829 197 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PCYT1AP49585 367 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 SLC26A2P50443 739 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 CLCNKBP51801 687 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ZBTB17Q13105 803 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 KLF10Q13118 480 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PDE1CQ14123 709 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PCLAFQ15004 111 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 UGCGQ16739 394 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PGS1Q32NB8 556 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ATG16L1Q676U5 607 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PLEKHG7Q6ZR37 379 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 FRA10AC1Q70Z53 315 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MON1BQ7L1V2 547 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 SLC51BQ86UW2 128 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 CRLF3Q8IUI8 442 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 DSELQ8IZU8 1212 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF687Q8N1G0 1237 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PDZD8Q8NEN9 1154 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 HERVK_113Q902F9 699 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 SEMA4DQ92854 862 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 VMP1Q96GC9 406 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 TMEM121Q9BTD3 319 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 NFKBIZQ9BYH8 718 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PNPOQ9NVS9 261 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ENPP5Q9UJA9 477 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 DOCK4Q8N1I0 1966 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 STX16-NPEPL1H3BU86 382 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 CHRNA1P02708 482 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PRKAR2AP13861 404 aaKnown RBP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 CD58P19256 250 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 GRIA1P42261 906 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MTM1Q13496 603 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 BAATQ14032 418 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 SEPT7Q16181 437 aaKnown RBP5.66□□□□□ -1.5
CSDE1-202ENST00000339438 HSDL1Q3SXM5 330 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 PRAMEF19Q5SWL8 479 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 TMTC4Q5T4D3 741 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 SLC9A4Q6AI14 798 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 TXNRD3NBQ6F5E7 133 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 EPGNQ6UW88 154 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 USP51Q70EK9 711 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 DLG3Q92796 817 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 KLHL25Q9H0H3 589 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 MARCH7Q9H992 704 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ARHGAP26Q9UNA1 814 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 WDR87Q6ZQQ6 2873 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 ADAMTS20P59510 1910 aa5.66□□□□□ -1.5
CSDE1-202ENST00000339438 IQANK1A0A1B0GTG1 560 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms