RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 INSIG1O15503 277 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 ZNF189O75820 626 aaPredicted RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 MMP2P08253 660 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 ZSCAN5DPP0CG00 497 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 AOC1P19801 751 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 HSPA9P38646 679 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 CKAP4Q07065 602 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 DNTTIP2Q5QJE6 756 aaKnown RBP17.75■□□□□ 0.43
CHGA-202ENST00000334654 PID1Q7Z2X4 250 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 KLHL7Q8IXQ5 586 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 CHST14Q8NCH0 376 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 SLCO2A1Q92959 643 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 SPATA13Q96N96 652 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 GLOD4Q9HC38 313 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 TRHDEQ9UKU6 1024 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 SLC8A2Q9UPR5 921 aa17.75■□□□□ 0.43
CHGA-202ENST00000334654 CTSLP07711 333 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 C7P10643 843 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 HOXB2P14652 356 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 GKP32189 559 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 CCNHP51946 323 aaPredicted RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 COPAP53621 1224 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 SNRPD1P62314 119 aaKnown RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 DSC2Q02487 901 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 MYLK3Q32MK0 819 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 P3H1Q32P28 736 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 EOGTQ5NDL2 527 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 SYT13Q7L8C5 426 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 SRLQ86TD4 932 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 PRPF39Q86UA1 669 aaKnown RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 STK40Q8N2I9 435 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 BBS5Q8N3I7 341 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 TADA1Q96BN2 335 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 ERLEC1Q96DZ1 483 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 NUDCD1Q96RS6 583 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 POLR1EQ9GZS1 481 aaKnown RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 NOD2Q9HC29 1040 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 KLHL8Q9P2G9 620 aaPredicted RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 EVLQ9UI08 416 aaPredicted RBP17.74■□□□□ 0.43
CHGA-202ENST00000334654 WASF2Q9Y6W5 498 aa17.74■□□□□ 0.43
CHGA-202ENST00000334654 TNFRSF10AO00220 468 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 BNIP3LO60238 219 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 OPHN1O60890 802 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 IFNB1P01574 187 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 NFKB1P19838 968 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 RPL22P35268 128 aaKnown RBP17.73■□□□□ 0.43
CHGA-202ENST00000334654 SCNN1BP51168 640 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 CLCN5P51795 746 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 LMNB2Q03252 620 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 CRY1Q16526 586 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 SDE2Q6IQ49 451 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 NCEH1Q6PIU2 408 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 BMP8AQ7Z5Y6 402 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 SPEM1Q8N4L4 309 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 OR6K2Q8NGY2 324 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 IMP4Q96G21 291 aaKnown RBP17.73■□□□□ 0.43
CHGA-202ENST00000334654 CCDC114Q96M63 670 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 GDAP1L1Q96MZ0 367 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 KRT12Q99456 494 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 SEMA3CQ99985 751 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 FERMT1Q9BQL6 677 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 SLC25A51Q9H1U9 297 aa17.73■□□□□ 0.43
CHGA-202ENST00000334654 METTL18O95568 372 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 POP4O95707 220 aaKnown RBP17.72■□□□□ 0.43
CHGA-202ENST00000334654 IGSF6O95976 241 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 ITKQ08881 620 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 MTAPQ13126 283 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 KLHDC8BQ8IXV7 354 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHGA-202ENST00000334654 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 FCRL5Q96RD9 977 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 HEPHQ9BQS7 1158 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 CARD6Q9BX69 1037 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 CPEB1Q9BZB8 566 aaKnown RBP17.72■□□□□ 0.43
CHGA-202ENST00000334654 MKRN2Q9H000 416 aaKnown RBP17.72■□□□□ 0.43
CHGA-202ENST00000334654 GBA3Q9H227 469 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 C11orf16Q9NQ32 467 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 SARDHQ9UL12 918 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 PPM1HQ9ULR3 514 aa17.72■□□□□ 0.43
CHGA-202ENST00000334654 ALOX15BO15296 676 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 ATG13O75143 517 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 STK10O94804 968 aaKnown RBP17.71■□□□□ 0.43
CHGA-202ENST00000334654 PSMB4P28070 264 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 SKOR1P84550 965 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 ELAVL3Q14576 367 aaKnown RBP17.71■□□□□ 0.43
CHGA-202ENST00000334654 RALGPS1Q5JS13 557 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 MAMSTRQ6ZN01 415 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 GSTA5Q7RTV2 222 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 LRRN4CLQ8ND94 238 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 OXNAD1Q96HP4 312 aaPredicted RBP17.71■□□□□ 0.43
CHGA-202ENST00000334654 RSPH9Q9H1X1 276 aaPredicted RBP17.71■□□□□ 0.43
CHGA-202ENST00000334654 PCDH9Q9HC56 1237 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 FEZ2Q9UHY8 353 aaPredicted RBP17.71■□□□□ 0.43
CHGA-202ENST00000334654 TTLL3Q9Y4R7 772 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 CUL9Q8IWT3 2517 aa17.71■□□□□ 0.43
CHGA-202ENST00000334654 CTAGE15A4D2H0 777 aa17.7■□□□□ 0.42
CHGA-202ENST00000334654 F5H423 210 aaPredicted RBP17.7■□□□□ 0.42
CHGA-202ENST00000334654 TRAFD1O14545 582 aaPredicted RBP17.7■□□□□ 0.42
CHGA-202ENST00000334654 TTI1O43156 1089 aa17.7■□□□□ 0.42
CHGA-202ENST00000334654 SYNCRIPO60506 623 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms