RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
KPNA4-201ENST00000334256 SLC4A11Q8NBS3 891 aa12.8□□□□□ -0.36
KPNA4-201ENST00000334256 MTMR12Q9C0I1 747 aa12.8□□□□□ -0.36
KPNA4-201ENST00000334256 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
KPNA4-201ENST00000334256 CUEDC1Q9NWM3 386 aaPredicted RBP12.8□□□□□ -0.36
KPNA4-201ENST00000334256 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
KPNA4-201ENST00000334256 NR2E1Q9Y466 385 aa12.8□□□□□ -0.36
KPNA4-201ENST00000334256 TUBG1P23258 451 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 FMO4P31512 558 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PNPLA4P41247 253 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PPIDQ08752 370 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ARMC12Q5T9G4 340 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 GPR139Q6DWJ6 353 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 POF1BQ8WVV4 589 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 FAM111AQ96PZ2 611 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 CIB4A0PJX0 185 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MPPED1O15442 326 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SLC6A9P48067 706 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 TUFMP49411 452 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ZNF473Q8WTR7 871 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 FBXO44Q9H4M3 255 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RAD51BO15315 384 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 TUBP50607 506 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PTPN5P54829 565 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SRYQ05066 204 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ZNF226Q9NYT6 803 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 COPAP53621 1224 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 HPS1Q92902 700 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PAGE5Q96GU1 130 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ENY2Q9NPA8 101 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 GJB4Q9NTQ9 266 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RBM22Q9NW64 420 aaKnown RBP eCLIP12.79□□□□□ -0.362e-76■□□□□ 10.1
KPNA4-201ENST00000334256 COG5Q9UP83 839 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MAGI1Q96QZ7 1491 aaPredicted RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 hCG_1807616A0A1W2PRN6 198 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 H3BSH0 61 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 UQCRC1P31930 480 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MAGEA12P43365 314 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PRKG2Q13237 762 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 TUBB3Q13509 450 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 KCNA10Q16322 511 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SSH3Q8TE77 659 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 OSBPL3Q9H4L5 887 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 IKZF2Q9UKS7 526 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 KHNYNO15037 678 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 IST1P53990 364 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 KCNJ2P63252 427 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SLC13A2Q13183 592 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MAPK14Q16539 360 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ESCO2Q56NI9 601 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 LMX1AQ8TE12 382 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 HEXDCQ8WVB3 486 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 EEF1AKMT1Q8WVE0 214 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 VPS9D1Q9Y2B5 631 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 PP2D1A8MPX8 630 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ENTPD1P49961 510 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 RAB2AP61019 212 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ZNF200P98182 395 aaPredicted RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
KPNA4-201ENST00000334256 CADM2Q8N3J6 435 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 SNX33Q8WV41 574 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 LPAR1Q92633 364 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 DNAJA3Q96EY1 480 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 ARL15Q9NXU5 204 aa12.79□□□□□ -0.36
KPNA4-201ENST00000334256 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 SLC25A14O95258 325 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 TKTL1P51854 596 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 RIDAP52758 137 aaKnown RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
KPNA4-201ENST00000334256 FOXN3O00409 490 aaPredicted RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 CSTBP04080 98 aaKnown RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
KPNA4-201ENST00000334256 HSF2Q03933 536 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms