RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 NEUROG2Q9H2A3 272 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 ETNK1Q9HBU6 452 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 SARDHQ9UL12 918 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 C5orf60A6NFR6 353 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 SIN3BO75182 1162 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 KLF8O95600 359 aaPredicted RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 PRKCGP05129 697 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 CD86P42081 329 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 RPL21P46778 160 aaKnown RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 ZXDAP98168 799 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 GPS2Q13227 327 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 RETSATQ6NUM9 610 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 BZW1Q7L1Q6 419 aaKnown RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 ZSWIM9Q86XI8 627 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 GSPT2Q8IYD1 628 aaKnown RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 CHPFQ8IZ52 775 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 CCDC89Q8N998 374 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 WFIKKN2Q8TEU8 576 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 PSKH2Q96QS6 385 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 MGME1Q9BQP7 344 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 TBC1D17Q9HA65 648 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 GLOD4Q9HC38 313 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 PCDHGC4Q9Y5F7 938 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 STON1Q9Y6Q2 735 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 DNAH14Q0VDD8 3507 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.74■□□□□ 0.27
SHOX-201ENST00000334060 ATP9BO43861 1147 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 GCATO75600 419 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 TMEM63AO94886 807 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 DCNP07585 359 aaKnown RBP16.74■□□□□ 0.27
SHOX-201ENST00000334060 CHRNA4P43681 627 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 DMC1Q14565 340 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 PPP1R7Q15435 360 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 PCSK7Q16549 785 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 P3H1Q32P28 736 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 C8orf74Q6P047 294 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 SERPINA13PQ6UXR4 307 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 LTB4R2Q9NPC1 389 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 RAB6BQ9NRW1 208 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 WNT16Q9UBV4 365 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 RSPH14Q9UHP6 348 aa16.74■□□□□ 0.27
SHOX-201ENST00000334060 GOLGA8MH3BSY2 632 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 EPHX1P07099 455 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 PDHA1P08559 390 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ITIH2P19823 946 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 CCNHP51946 323 aaPredicted RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 GRSF1Q12849 480 aaKnown RBP eCLIP16.73■□□□□ 0.27
SHOX-201ENST00000334060 PTK6Q13882 451 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 C9orf64Q5T6V5 341 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 TMEM92Q6UXU6 159 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 CAMK1DQ8IU85 385 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ANKZF1Q9H8Y5 726 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 DONSONQ9NYP3 566 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 STARD13Q9Y3M8 1113 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 A0A1W2PQF6 199 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 FAM170BA6NMN3 283 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 PMPCBO75439 489 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 BANF1O75531 89 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ATP5BP06576 529 aaKnown RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 RENBPP51606 427 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 STARD6P59095 220 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 SKOR1P84550 965 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 TRAF2Q12933 501 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 TUBB2AQ13885 445 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 INO80DQ53TQ3 878 aaPredicted RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 TMEM31Q5JXX7 168 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 CWF19L1Q69YN2 538 aaKnown RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 ZNF852Q6ZMS4 543 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ARHGEF18Q6ZSZ5 1173 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 RYBPQ8N488 228 aaPredicted RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 PDCD7Q8N8D1 485 aaKnown RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 CPT1BQ92523 772 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 TUBB2BQ9BVA1 445 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 FRMD8P1Q9BZ68 369 aaPredicted RBP16.73■□□□□ 0.27
SHOX-201ENST00000334060 GBA3Q9H227 469 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ZDHHC6Q9H6R6 413 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 LMAN1LQ9HAT1 526 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 CD248Q9HCU0 757 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 HOMER3Q9NSC5 361 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 GRHL1Q9NZI5 618 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 SEPT3Q9UH03 358 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 ASIC3Q9UHC3 531 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 PLA2G4CQ9UP65 541 aa16.73■□□□□ 0.27
SHOX-201ENST00000334060 MYBL2P10244 700 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 H2AFXP16104 143 aaPredicted RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 STIP1P31948 543 aaKnown RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 GUCY2DQ02846 1103 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 UBAP2Q5T6F2 1119 aaKnown RBP16.72■□□□□ 0.27
SHOX-201ENST00000334060 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
SHOX-201ENST00000334060 LRRC49Q8IUZ0 686 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms