RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 NMRK1Q9NWW6 199 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PEX11AO75192 247 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CSH1P0DML2 217 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CSH2P0DML3 217 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 MRPS22P82650 360 aaKnown RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PFKPQ01813 784 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 COPS7BQ9H9Q2 264 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 LNPEPQ9UIQ6 1025 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 HPCAP84074 193 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CRY1Q16526 586 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PTPRNQ16849 979 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TEX44Q53QW1 395 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 USP45Q70EL2 814 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 DHFR2Q86XF0 187 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 AGAP11Q8TF27 550 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 C2orf49Q9BVC5 232 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CHKBQ9Y259 395 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TMEM88BA6NKF7 163 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 OTUD3Q5T2D3 398 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 OLFML2BQ68BL8 750 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 PLD3Q8IV08 490 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 BHLHE22Q8NFJ8 381 aaPredicted RBP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 QKIQ96PU8 341 aaKnown RBP eCLIP13.14□□□□□ -0.31
VSTM4-202ENST00000332853 GMLQ99445 158 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ABCG8Q9H221 673 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 GLOD4Q9HC38 313 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
VSTM4-202ENST00000332853 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 ATP6AP2A0A1C7CYW4 349 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 ATP6AP2O75787 350 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 KRT6AP02538 564 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 KRT6BP04259 564 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 CREB1P16220 341 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 KRT6CP48668 564 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 HSPA13P48723 471 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 OPTCQ9UBM4 332 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 PADI4Q9UM07 663 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SUFUQ9UMX1 484 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 C1orf232A0A0U1RR37 186 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 FFAR3O14843 346 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 GPR42O15529 346 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SEPT4O43236 478 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 IL1R2P27930 398 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 PTP4A2Q12974 167 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TAC4Q86UU9 113 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 P3H2Q8IVL5 708 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 C12orf50Q8NA57 414 aaPredicted RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TBCDQ9BTW9 1192 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 KLQ9UEF7 1012 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 BLOC1S6Q9UL45 172 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 MYH3P11055 1940 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 CCL22O00626 93 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 LRPAP1P30533 357 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 CTNNB1P35222 781 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 GABRB2P47870 512 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 CLCN5P51795 746 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 LRRC8DQ7L1W4 858 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF567Q8N184 647 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 XYLBO75191 536 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 MLNP12872 115 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 OASLQ15646 514 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SETMARQ53H47 684 aaPredicted RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 MARK2Q7KZI7 788 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 FBXO5Q9UKT4 447 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 MYH8P13535 1937 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 TULP2O00295 520 aa13.13□□□□□ -0.31
VSTM4-202ENST00000332853 CD3EAPO15446 510 aaKnown RBP13.13□□□□□ -0.31
VSTM4-202ENST00000332853 ENTPD5O75356 428 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms