RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ELAVL3Q14576 367 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 SYCP1Q15431 976 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 TAF5Q15542 800 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 C9orf64Q5T6V5 341 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 FAM102AQ5T9C2 384 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 RNF219Q5W0B1 726 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 CXorf57Q6NSI4 855 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 FBXL22Q6P050 247 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 LRRC31Q6UY01 552 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 DSG4Q86SJ6 1040 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 ZSCAN30Q86W11 494 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 CCNJLQ8IV13 435 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 CARNMT1Q8N4J0 409 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 DCAF4L2Q8NA75 395 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 C3orf20Q8ND61 904 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 CENPIQ92674 756 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 RNF34Q969K3 372 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 TOE1Q96GM8 510 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 VCPIP1Q96JH7 1222 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 RPRD1AQ96P16 312 aaPredicted RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 BTBD1Q9H0C5 482 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 VPS16Q9H269 839 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PABPC3Q9H361 631 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 PIGVQ9NUD9 493 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 XPO7Q9UIA9 1087 aaKnown RBP6.5□□□□□ -1.37
SMG1-201ENST00000330588 HS3ST2Q9Y278 367 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 INVSQ9Y283 1065 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 NCKAP1Q9Y2A7 1128 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 PCDHGB2Q9Y5G2 931 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 OR51B4Q9Y5P0 310 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 HS3ST4Q9Y661 456 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 AK5Q9Y6K8 562 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 GVINP1Q7Z2Y8 2422 aa6.5□□□□□ -1.37
SMG1-201ENST00000330588 MED19A0JLT2 244 aaPredicted RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 ILVBLA1L0T0 632 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 MEI4A8MW99 385 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 EIF3CLB5ME19 914 aaKnown RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 GJB3O75712 270 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 GFPT2O94808 682 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 KCNK5O95279 499 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CER1O95813 267 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 MMEP08473 750 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 PNMA6AP0CW24 399 aaPredicted RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 FERP16591 822 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CHRNB2P17787 502 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 ENGP17813 658 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 C5AR1P21730 350 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 ITPKAP23677 461 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 PMLP29590 882 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 NSFP46459 744 aaKnown RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 GRIA4P48058 902 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SULT1E1P49888 294 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CCR5P51681 352 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 GEMIN4P57678 1058 aaKnown RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 UBXN1Q04323 297 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SLC20A2Q08357 652 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CCDC15Q0P6D6 951 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SCAPQ12770 1279 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 PTP4A2Q12974 167 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SEMA3BQ13214 749 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CST6Q15828 149 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CLEC16AQ2KHT3 1053 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 KLHL40Q2TBA0 621 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 ARL13BQ3SXY8 428 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FILIP1LQ4L180 1135 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 HSP90AA4PQ58FG1 418 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 MANEALQ5VSG8 457 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 NAA35Q5VZE5 725 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 MON1BQ7L1V2 547 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FRS2Q8WU20 508 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SORCS1Q8WY21 1168 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 NTAN1Q96AB6 310 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 MYEOVQ96EZ4 313 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 CCDC114Q96M63 670 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 TBCBQ99426 244 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 EIF3CQ99613 913 aaKnown RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FEM1AQ9BSK4 669 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FUCA2Q9BTY2 467 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 BHLHE41Q9C0J9 482 aaPredicted RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 TKTL2Q9H0I9 626 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 OSBPL2Q9H1P3 480 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SLC32A1Q9H598 525 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 LIN7BQ9HAP6 207 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 ZDHHC4Q9NPG8 344 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 RXFP3Q9NSD7 469 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 FAM207AQ9NSI2 230 aaPredicted RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 IGSF5Q9NSI5 407 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 TMEM74BQ9NUR3 256 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 DOCK4Q8N1I0 1966 aa6.49□□□□□ -1.37
SMG1-201ENST00000330588 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
SMG1-201ENST00000330588 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
SMG1-201ENST00000330588 TCRBV5S1A1TA0A578 114 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms