RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 DENND4CQ5VZ89 1909 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZCWPW2A0A1B0GU75 182 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 FAM237BA0A1B0GVD1 139 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 KRT37O76014 449 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 MMP2P08253 660 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 MYOGP15173 224 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CA4P22748 312 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 HOXD9P28356 352 aaPredicted RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 WNT3AP56704 352 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZNF177Q13360 481 aaPredicted RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 MPP3Q13368 585 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 IL31Q6EBC2 164 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 MARK2Q7KZI7 788 aaKnown RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CERS2Q96G23 380 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 DOCK6Q96HP0 2047 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 PAIP2Q9BPZ3 127 aaKnown RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 DDX50Q9BQ39 737 aaKnown RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 GRID1Q9ULK0 1009 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 SOX13Q9UN79 622 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 A0A1B0GVM2 712 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 HMX2A2RU54 273 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 TCAF2A6NFQ2 919 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CCL16O15467 120 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 EZRP15311 586 aaKnown RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 GBP2P32456 591 aaPredicted RBP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CD86P42081 329 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 BMPR2Q13873 1038 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 PCSK7Q16549 785 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 PDK4Q16654 411 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 LGSNQ5TDP6 509 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 FAM47EQ6ZV65 393 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CHST9Q7L1S5 443 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 BANPQ8N9N5 519 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 MICAL1Q8TDZ2 1067 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CDKL2Q92772 493 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 CORO1BQ9BR76 489 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 SPON2Q9BUD6 331 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 FSD1LQ9BXM9 530 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 ACTL7AQ9Y615 435 aa20.55■□□□□ 0.88
RIPPLY3-201ENST00000329553 A0A1W2PRU2 124 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 CLCN4P51793 760 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 SLC1A5Q15758 541 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 TMCO4Q5TGY1 634 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 ELMOD1Q8N336 334 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 TTC16Q8NEE8 873 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 ARRDC2Q8TBH0 407 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZNF778Q96MU6 729 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 PHTF1Q9UMS5 762 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 TBC1D30Q9Y2I9 924 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 MYO7AQ13402 2215 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 ILVBLA1L0T0 632 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 LATS1O95835 1130 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 RHOCP08134 193 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 MYL4P12829 197 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 GLDCP23378 1020 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 NMBRP28336 390 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 CHRNA4P43681 627 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 DNAJC3Q13217 504 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 E2F5Q15329 346 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 STXBP5Q5T5C0 1151 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 Q6ZNB5 142 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 KIFC1Q9BW19 673 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 PSAT1Q9Y617 370 aa20.54■□□□□ 0.88
RIPPLY3-201ENST00000329553 MTCL1Q9Y4B5 1905 aaKnown RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 MUSKO15146 869 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 KRT38O76015 456 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 UNC5CO95185 931 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 CKMP06732 381 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 KRT16P08779 473 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 PYGBP11216 843 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 IRS1P35568 1242 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 SLC18A2Q05940 514 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 CAMK1Q14012 370 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 POU6F1Q14863 301 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 PPM1LQ5SGD2 360 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 MROH9Q5TGP6 573 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 SETD3Q86TU7 594 aaPredicted RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 SPOCK2Q92563 424 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 ALKBH8Q96BT7 664 aaKnown RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZNF599Q96NL3 588 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 VPS45Q9NRW7 570 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 CCDC78A2IDD5 438 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 GRXCR1A8MXD5 290 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 KDELR3O43731 214 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 GJB3O75712 270 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 SERPINB9P50453 376 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 PCID2Q5JVF3 399 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 CXorf57Q6NSI4 855 aaKnown RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 PACS1Q6VY07 963 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 RASSF3Q86WH2 238 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 KIF2BQ8N4N8 673 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 TADA1Q96BN2 335 aa20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 MTIF3Q9H2K0 278 aaKnown RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 C12orf65Q9H3J6 166 aaKnown RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.53■□□□□ 0.88
RIPPLY3-201ENST00000329553 GRM6O15303 877 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms