RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ALPK3Q96L96 1907 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 MUSKO15146 869 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 OLFM2O95897 454 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 LRG1P02750 347 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 NUMBP49757 651 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 SERPINH1P50454 418 aaKnown RBP15.12■□□□□ 0.01
TPM3-205ENST00000328159 PDE1CQ14123 709 aaPredicted RBP15.12■□□□□ 0.01
TPM3-205ENST00000328159 SEPT6Q14141 434 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 STXBP5Q5T5C0 1151 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 TXNDC8Q6A555 127 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 ESRP1Q6NXG1 681 aaKnown RBP15.12■□□□□ 0.01
TPM3-205ENST00000328159 LILRA6Q6PI73 481 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 OTOAQ7RTW8 1153 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 SETD3Q86TU7 594 aaPredicted RBP15.12■□□□□ 0.01
TPM3-205ENST00000328159 BBS5Q8N3I7 341 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 CCT6BQ92526 530 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 PTPRN2Q92932 1015 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 ISL2Q96A47 359 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 RANBP9Q96S59 729 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 PLCD4Q9BRC7 762 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 MCMBPQ9BTE3 642 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 PRKD2Q9BZL6 878 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 TREX1Q9NSU2 369 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 CXXC1Q9P0U4 656 aaPredicted RBP15.12■□□□□ 0.01
TPM3-205ENST00000328159 TBC1D30Q9Y2I9 924 aa15.12■□□□□ 0.01
TPM3-205ENST00000328159 HEATR9A2RTY3 570 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 GOLGA8TH3BQL2 631 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TIMM44O43615 452 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 GLRA3O75311 464 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 VAPBO95292 243 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ADH1AP07327 375 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 F7P08709 466 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 NEFHP12036 1026 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 HDCP19113 662 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 BGNP21810 368 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 GABRR2P28476 465 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TYK2P29597 1187 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 MAGEA12P43365 314 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ARCN1P48444 511 aaKnown RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 SERPINB8P50452 374 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 FSTL4Q6MZW2 842 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 CCDC149Q6ZUS6 474 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 CCDC63Q8NA47 563 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ADAMTS19Q8TE59 1207 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 SNX15Q9NRS6 342 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 HAUS2Q9NVX0 235 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 SLC2A6Q9UGQ3 507 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 SEPT3Q9UH03 358 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 DCDC2Q9UHG0 476 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 MTO1Q9Y2Z2 717 aaKnown RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 LOC285095A0A1B0GVY8 99 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 GJB3O75712 270 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TOP3BO95985 862 aaKnown RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 PAMP19021 973 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 CYP4F8P98187 520 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 MSLNQ13421 630 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 CNGA3Q16281 694 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 SIRPB2Q5JXA9 342 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ALG1LQ6GMV1 187 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 KIAA0930Q6ICG6 404 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 KYAT3Q6YP21 454 aaKnown RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 UBE2Q1Q7Z7E8 422 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TMC8Q8IU68 726 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 CNTN4Q8IWV2 1026 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 TRIM42Q8IWZ5 723 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 HS6ST3Q8IZP7 471 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 MRPS31Q92665 395 aaKnown RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 ATP2A3Q93084 1043 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ATXN7L3BQ96GX2 97 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ACE2Q9BYF1 805 aaPredicted RBP15.11■□□□□ 0.01
TPM3-205ENST00000328159 KDM4CQ9H3R0 1056 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 KLHL14Q9P2G3 628 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 ACTL7AQ9Y615 435 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 CPQQ9Y646 472 aa15.11■□□□□ 0.01
TPM3-205ENST00000328159 GREM1O60565 184 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 C8AP07357 584 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 ATXN1LP0C7T5 689 aaKnown RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 GLDCP23378 1020 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 ARNTP27540 789 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 ABCG1P45844 678 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 RFTN1Q14699 578 aaPredicted RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 INSCQ1MX18 579 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 LACTB2Q53H82 288 aaPredicted RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 PPM1JQ5JR12 505 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 RNF219Q5W0B1 726 aaPredicted RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 RNF43Q68DV7 783 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 CXorf57Q6NSI4 855 aaKnown RBP15.1■□□□□ 0.01
TPM3-205ENST00000328159 Q6ZNB5 142 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 GAREM2Q75VX8 874 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 TRPM8Q7Z2W7 1104 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 CMC1Q7Z7K0 106 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 KREMEN2Q8NCW0 462 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 VPS39Q96JC1 886 aa15.1■□□□□ 0.01
TPM3-205ENST00000328159 FEM1CQ96JP0 617 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms