RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 GRIA4P48058 902 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC26A2P50443 739 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 FAM131AQ6UXB0 335 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MARK4Q96L34 752 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 CAB39LQ9H9S4 337 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNRF3Q9ULT6 936 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MAGEC1O60732 1142 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 UGT2B11O75310 529 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MICAL2O94851 1124 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 GCNT1Q02742 428 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MED22Q15528 200 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SWI5Q1ZZU3 235 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 PDPRQ8NCN5 879 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TAS1R2Q8TE23 839 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SEMA4BQ9NPR2 832 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TRIM38O00635 465 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TFECO14948 347 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 FMO4P31512 558 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SPIBQ01892 262 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 CAMK1Q14012 370 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TRNAU1APQ9NX07 287 aaKnown RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ITGAVP06756 1048 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 UGT1A5P35504 534 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MMP13P45452 471 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TBX4P57082 545 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 PSME3P61289 254 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 DPYSL3Q14195 570 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 NFE2Q16621 373 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 LIPMQ5VYY2 423 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SNX7Q9UNH6 387 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SAMHD1Q9Y3Z3 626 aaKnown RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 CNTNAP2Q9UHC6 1331 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ENTPD5O75356 428 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 TCEA3O75764 348 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 KRT36O76013 467 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SETMARQ53H47 684 aaPredicted RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 GNASQ5JWF2 1037 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 MTFMTQ96DP5 389 aaKnown RBP17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 GPATCH2LQ9NWQ4 482 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 USP45Q70EL2 814 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 RNF180Q86T96 592 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ZFP28Q8NHY6 868 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNF607Q96SK3 696 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ALG9Q9H6U8 611 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 GPRC5CQ9NQ84 441 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 RAB26Q9ULW5 256 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 PAEPP09466 180 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 RPL9P32969 192 aaKnown RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 DHRS7Q9Y394 339 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 ENDOD1O94919 500 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 PCDH8O95206 1070 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 PPIL2Q13356 520 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CTXN3Q4LDR2 81 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 MCFD2Q8NI22 146 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 FAR1Q8WVX9 515 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 MUC13Q9H3R2 512 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC12A8A0AV02 714 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 RTN3O95197 1032 aaPredicted RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CCDC166P0CW27 439 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 TUBP50607 506 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 R3HCC1LQ7Z5L2 792 aaKnown RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 RAB43Q86YS6 212 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 ZC3H7AQ8IWR0 971 aaKnown RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CCNKO75909 580 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 OR5F1O95221 314 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 TLX1P31314 330 aaPredicted RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CRTC3Q6UUV7 619 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 PTCD2Q8WV60 388 aaKnown RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 MFHAS1Q9Y4C4 1052 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 GPC6Q9Y625 555 aaPredicted RBP17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 AP4B1Q9Y6B7 739 aa17.02■□□□□ 0.32
SMCHD1-201ENST00000320876 CHST10O43529 356 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 RARAP10276 462 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 EPORP19235 508 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 CXCR2P25025 360 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 SGCGQ13326 291 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 ATL1Q8WXF7 558 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 PPP3R2Q96LZ3 170 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 A0A0B4J269 797 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 ENPEPQ07075 957 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 HPS6Q86YV9 775 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 SLIT1O75093 1534 aa17.02■□□□□ 0.31
SMCHD1-201ENST00000320876 ADSLP30566 484 aaPredicted RBP17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 IL18R1Q13478 541 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 PLET1Q6UQ28 207 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SCAIQ8N9R8 606 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 RTKNQ9BST9 563 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 IGSF6O95976 241 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 CBX5P45973 191 aa17.01■□□□□ 0.31
SMCHD1-201ENST00000320876 SELENOMQ8WWX9 145 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms