RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CASP10Q92851 521 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 GBP5Q96PP8 586 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 RTKNQ9BST9 563 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 TSC2P49815 1807 aa17.64■□□□□ 0.41
COL9A1-201ENST00000320755 CABYRO75952 493 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 HLA-DQB2P05538 268 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 THRAP10827 490 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 SLC12A2P55011 1212 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 EP400NLQ6ZTU2 488 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 DSELQ8IZU8 1212 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 KLHL4Q9C0H6 718 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 TRPV2Q9Y5S1 764 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 ARNTP27540 789 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 RAB10P61026 200 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 CYLC2Q14093 348 aaPredicted RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 TAF1CQ15572 869 aaPredicted RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 ZNF789Q5FWF6 425 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 FOXB2Q5VYV0 432 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 C14orf80Q86SX3 495 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 C2orf69Q8N8R5 385 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 KYQ8NBH2 561 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 TMA16Q96EY4 203 aaKnown RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 MID2Q9UJV3 735 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 CDYLQ9Y232 598 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 RGSL1A5PLK6 1076 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 IQCA1LA6NCM1 817 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 MAFKO60675 156 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 MTTPP55157 894 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 MRPS22P82650 360 aaKnown RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 PRKAA1Q13131 559 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 SH2D4BQ5SQS7 431 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 RBM20Q5T481 1227 aaKnown RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 DENND5AQ6IQ26 1287 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 CNSTQ6PJW8 725 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 LDB1Q86U70 411 aaPredicted RBP17.63■□□□□ 0.41
COL9A1-201ENST00000320755 LSMEM2Q8N112 164 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 SNX31Q8N9S9 440 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 FAM156AQ8NDB6 213 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 MCMBPQ9BTE3 642 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
COL9A1-201ENST00000320755 ANXA9O76027 345 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 MT-CO1P00395 513 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 APOA4P06727 396 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 CCNCP24863 283 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 THPOP40225 353 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 THOP1P52888 689 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 GRIK3Q13003 919 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 METTL21CQ5VZV1 264 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 OVOS1Q6IE37 1185 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 STYXQ8WUJ0 223 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 HEXDCQ8WVB3 486 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 PPP2R3CQ969Q6 453 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 GCNAQ96QF7 691 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 ART3Q13508 389 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 PDSS2Q86YH6 399 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 DPF3Q92784 378 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 CSNK1G1Q9HCP0 422 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 ANKRD6Q9Y2G4 727 aa17.62■□□□□ 0.41
COL9A1-201ENST00000320755 CAPN8A6NHC0 703 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 MGEA5O60502 916 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 XRCC1P18887 633 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 CCR1P32246 355 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PAPOLAP51003 745 aaKnown RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 SLC5A3P53794 718 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 MMEL1Q495T6 779 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PHF21BQ96EK2 531 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 KLHL5Q96PQ7 755 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 NPAS2Q99743 824 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 POMKQ9H5K3 350 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 FBXO5Q9UKT4 447 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 IRAK2O43187 625 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 H2AFYO75367 372 aaKnown RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 BTKQ06187 659 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 MSLNQ13421 630 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 MED21Q13503 144 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 UGP2Q16851 508 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 TXNDC5Q8NBS9 432 aaKnown RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 JADE3Q92613 823 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 FCRL5Q96RD9 977 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 ACBD6Q9BR61 282 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 OSBPL2Q9H1P3 480 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 NSMCE4AQ9NXX6 385 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PADI3Q9ULW8 664 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 TCAF1Q9Y4C2 921 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 MATN3O15232 486 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 TSPAN8P19075 237 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PPARGP37231 505 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 ARCN1P48444 511 aaKnown RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 FLOT2Q14254 428 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 NEPROQ6NW34 567 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PABPC5Q96DU9 382 aaKnown RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 NR1H4Q96RI1 486 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 NT5MQ9NPB1 228 aa17.61■□□□□ 0.41
COL9A1-201ENST00000320755 ABI2Q9NYB9 513 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-201ENST00000320755 PSMD3O43242 534 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 FAM163BP0C2L3 166 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 HADHAP40939 763 aa17.6■□□□□ 0.41
COL9A1-201ENST00000320755 FRG1Q14331 258 aaKnown RBP17.6■□□□□ 0.41
COL9A1-201ENST00000320755 TSTD2Q5T7W7 516 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms