RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TSPAN3O60637 253 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 TBL1XO60907 577 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SIN3BO75182 1162 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 PYGBP11216 843 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 PAMP19021 973 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 HLA-DPA1P20036 260 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SERPINH1P50454 418 aaKnown RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 MAXP61244 160 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 MSLNQ13421 630 aaPredicted RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CAMK1Q14012 370 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SLC1A5Q15758 541 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 INO80DQ53TQ3 878 aaPredicted RBP18.07■□□□□ 0.48
RAB39A-201ENST00000320578 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CPLX4Q7Z7G2 160 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 KCNMB4Q86W47 210 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 CNTN4Q8IWV2 1026 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 PEX13Q92968 403 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SEMA3CQ99985 751 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 SPON2Q9BUD6 331 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 VPS11Q9H270 941 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 TREX1Q9NSU2 369 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 TXNDC16Q9P2K2 825 aa18.07■□□□□ 0.48
RAB39A-201ENST00000320578 A0A1W2PRU2 124 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 E2F8A0AVK6 867 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 CCL16O15467 120 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 SERPINF2P08697 491 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 DHRS4L1P0CG22 281 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 ERVK-10P10266 1014 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 MYL4P12829 197 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 ALADP13716 330 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 NMBRP28336 390 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 SPRP35270 261 aaPredicted RBP18.06■□□□□ 0.48
RAB39A-201ENST00000320578 HADHAP40939 763 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 PPARDQ03181 441 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 PDK4Q16654 411 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 MPPE1Q53F39 396 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 HHATQ5VTY9 493 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 RNF219Q5W0B1 726 aaPredicted RBP18.06■□□□□ 0.48
RAB39A-201ENST00000320578 KIAA0930Q6ICG6 404 aaPredicted RBP18.06■□□□□ 0.48
RAB39A-201ENST00000320578 CES3Q6UWW8 571 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 TCP10LQ8TDR4 215 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 MCMBPQ9BTE3 642 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 SLC46A2Q9BY10 475 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 ARIH1Q9Y4X5 557 aaPredicted RBP18.06■□□□□ 0.48
RAB39A-201ENST00000320578 OR51B4Q9Y5P0 310 aa18.06■□□□□ 0.48
RAB39A-201ENST00000320578 H0Y626 953 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 COPEO14579 308 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 XYLBO75191 536 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ZMPSTE24O75844 475 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 FGF1P05230 155 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CR2P20023 1033 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 IHHQ14623 411 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 SEPT7Q16181 437 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 RALGPS1Q5JS13 557 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 TAX1BP1Q86VP1 789 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 LRRC34Q8IZ02 419 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 SHKBP1Q8TBC3 707 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 RBBP8Q99708 897 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CINPQ9BW66 212 aaPredicted RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 TASP1Q9H6P5 420 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 MAN1C1Q9NR34 630 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 C20orf96Q9NUD7 363 aaPredicted RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ZDHHC7Q9NXF8 308 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CFAP97Q9P2B7 532 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 DNMT3BQ9UBC3 853 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 RIMKLBQ9ULI2 386 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 DENND4CQ5VZ89 1909 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 LEFTY2O00292 366 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 EBAG9O00559 213 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 MUSKO15146 869 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 GRM6O15303 877 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ITGA2BP08514 1039 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ATXN1LP0C7T5 689 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 TCF3P15923 654 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CRHR1P34998 444 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ETV4P43268 484 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ARCN1P48444 511 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CCT5P48643 541 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 POLD2P49005 469 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 LIMK2P53671 638 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 CDK18Q07002 472 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 NSUN2Q08J23 767 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 POU6F1Q14863 301 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ARHGAP15Q53QZ3 475 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 MROH9Q5TGP6 573 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 GKAP1Q5VSY0 366 aaPredicted RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 FYB2Q5VWT5 728 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ELMSAN1Q6PJG2 1045 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 LVRNQ6Q4G3 990 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 PIGWQ7Z7B1 504 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 ALG14Q96F25 216 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
RAB39A-201ENST00000320578 FEM1AQ9BSK4 669 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 MUC3BQ9H195 1237 aa18.05■□□□□ 0.48
RAB39A-201ENST00000320578 MTCL1Q9Y4B5 1905 aaKnown RBP18.04■□□□□ 0.48
RAB39A-201ENST00000320578 TIMM44O43615 452 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms