RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CDKL1Q00532 357 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 MSLNQ13421 630 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-201ENST00000317716 NOMO1Q15155 1222 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 ARHGAP17Q68EM7 881 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 SPESP1Q6UW49 350 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 FKBP9P1Q75LS8 142 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 FNIP1Q8TF40 1166 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 DDX1Q92499 740 aaKnown RBP7.62□□□□□ -1.19
CDHR3-201ENST00000317716 C1orf50Q9BV19 199 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 MAGEB5Q9BZ81 275 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 SENP6Q9GZR1 1112 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-201ENST00000317716 PLEKHA5Q9HAU0 1116 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 DDIT4Q9NX09 232 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 GIMAP2Q9UG22 337 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 STAP1Q9ULZ2 295 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 BARX2Q9UMQ3 279 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-201ENST00000317716 PCDHGB4Q9UN71 923 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 EFR3BQ9Y2G0 817 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 PCDHGB5Q9Y5G0 923 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 SNX8Q9Y5X2 465 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 COL24A1Q17RW2 1714 aa7.62□□□□□ -1.19
CDHR3-201ENST00000317716 MATN2O00339 956 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 B4GALT5O43286 388 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MTHFD1P11586 935 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SLC5A2P31639 672 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PIGFQ07326 219 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PWP1Q13610 501 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PGM5Q15124 567 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CTC1Q2NKJ3 1217 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SAMD4BQ5PRF9 694 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PRAMEF19Q5SWL8 479 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 FKBP1CQ5VVH2 108 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SLCO6A1Q86UG4 719 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 RALGPS2Q86X27 583 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CPNE9Q8IYJ1 553 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 RP9Q8TA86 221 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 DMRTB1Q96MA1 342 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CCDC28BQ9BUN5 200 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 FICDQ9BVA6 458 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 HERC2P3Q9BVR0 1158 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CCDC106Q9BWC9 280 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ABCG8Q9H221 673 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CDHR5Q9HBB8 845 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ZC4H2Q9NQZ6 224 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CHRAC1Q9NRG0 131 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CAB39Q9Y376 341 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PTPRJQ12913 1337 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 A0A087WZ62 844 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 E7ENX8 843 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 EI24O14681 340 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 BIRC5O15392 142 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ICAM1P05362 532 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 NFICP08651 508 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF37AP17032 561 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PGAM1P18669 254 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MAGEA8P43361 318 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 RABGGTBP53611 331 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CYP4F2P78329 520 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 NRG1Q02297 640 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CHRNB3Q05901 458 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CYP4F3Q08477 520 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CCDC153Q494R4 210 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 VPS26BQ4G0F5 336 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 LRRC38Q5VT99 294 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ABRAXAS1Q6UWZ7 409 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 LDB1Q86U70 411 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PLD6Q8N2A8 252 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PNPLA1Q8N8W4 532 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PPHLN1Q8NEY8 458 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 OR7A2PQ8NGA2 310 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SPATA33Q96N06 139 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 TCF12Q99081 682 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 RIBC2Q9H4K1 309 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ALG2Q9H553 416 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ALG9Q9H6U8 611 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 HMG20AQ9NP66 347 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MID1IP1Q9NPA3 183 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SPAG4Q9NPE6 437 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 IPO11Q9UI26 975 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MOSPD1Q9UJG1 213 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 NUDT5Q9UKK9 219 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 GPC6Q9Y625 555 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SF3B1O75533 1304 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SNED1Q8TER0 1413 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 RFPL1O75677 317 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SEC24AO95486 1093 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 HMBSP08397 361 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ATXN8OSP0DMR3 200 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 EIF4BP23588 611 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 XIAPP98170 497 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 CYP2A13Q16696 494 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ARL13BQ3SXY8 428 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 EEF1DP3Q658K8 133 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 ERI1Q8IV48 349 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 SCN4BQ8IWT1 228 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 FBXO16Q8IX29 292 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MTMR14Q8NCE2 650 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms