RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FIBCD1Q8N539 461 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 OR13C4Q8NGS5 318 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 BLOC1S5Q8TDH9 187 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 POF1BQ8WVV4 589 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 ZNF75CPQ92670 426 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 TSGA13Q96PP4 275 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 KLF16Q9BXK1 252 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 SHCBP1LQ9BZQ2 653 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 STMN4Q9H169 189 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 ZDHHC4Q9NPG8 344 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 FBXO6Q9NRD1 293 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 ANAPC1Q9H1A4 1944 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 DRGXA6NNA5 263 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 RFXAPO00287 272 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 INSIG1O15503 277 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 ALDH1A2O94788 518 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 AHSGP02765 367 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 POLBP06746 335 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 WEE1P30291 646 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 GNA12Q03113 381 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 SIRPB2Q5JXA9 342 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 RBM20Q5T481 1227 aaKnown RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 TTC39BQ5VTQ0 682 aaPredicted RBP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 CEP97Q8IW35 865 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 C10orf67Q8IYJ2 551 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 CABS1Q96KC9 395 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 MUC3BQ9H195 1237 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 LINC00597Q9H2U6 94 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 TLE6Q9H808 572 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM216Q9P0N5 145 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 CFAP97Q9P2B7 532 aa7.09□□□□□ -1.27
LYSMD3-201ENST00000315948 KIAA1671Q9BY89 1806 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 A6NNZ2 444 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 COPEO14579 308 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 SNX3O60493 162 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 HAUS5O94927 633 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 SNRPAP09012 282 aaKnown RBP7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ARSAP15289 507 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 LAG3P18627 525 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 STK19P49842 368 aaPredicted RBP7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ARF5P84085 180 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 LBRQ14739 615 aaKnown RBP7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 GRM3Q14832 879 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 PIGWQ7Z7B1 504 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ADGRD2Q7Z7M1 963 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 TMC8Q8IU68 726 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ARHGAP18Q8N392 663 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ATP13A1Q9HD20 1204 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 BPIFA1Q9NP55 256 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 EIF2B3Q9NR50 452 aaKnown RBP7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC39A10Q9ULF5 831 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 PHTF1Q9UMS5 762 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.28
LYSMD3-201ENST00000315948 ALPK3Q96L96 1907 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PRPF4O43172 522 aaKnown RBP eCLIP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ITM2AO43736 263 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CA3P07451 260 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC2A3P11169 496 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CD1EP15812 388 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC1A2P43004 574 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PDE1BQ01064 536 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CDH17Q12864 832 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 MSLNQ13421 630 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 FBXO48Q5FWF7 155 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 N4BP2L1Q5TBK1 243 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 GKAP1Q5VSY0 366 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 NAIF1Q69YI7 327 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ZNF470Q6ECI4 717 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CNSTQ6PJW8 725 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 C6orf89Q6UWU4 347 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SRLQ86TD4 932 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SLC41A1Q8IVJ1 513 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 HERC6Q8IVU3 1022 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CMTM8Q8IZV2 173 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 KREMEN2Q8NCW0 462 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 OR13J1Q8NGT2 312 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 IMP4Q96G21 291 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 APOPT1Q96IL0 206 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 FCRL5Q96RD9 977 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PITPNM3Q9BZ71 974 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 MTG2Q9H4K7 406 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 LRRC40Q9H9A6 602 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PDFQ9HBH1 243 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 TRHDEQ9UKU6 1024 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 PCDHB12Q9Y5F1 795 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 LTBP2Q14767 1821 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 IQANK1A0A1B0GTG1 560 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 CACNG3O60359 315 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ATXN1LP0C7T5 689 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ATP5DP30049 168 aa7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 ARCN1P48444 511 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 SARNPP82979 210 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-201ENST00000315948 FPGSQ05932 587 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms