RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PSMA4P25789 261 aaKnown RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 ARHGAP1Q07960 439 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 GSTA3Q16772 222 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 KHDRBS2Q5VWX1 349 aaKnown RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 SELENOMQ8WWX9 145 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 MYO19Q96H55 970 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SNX27Q96L92 541 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 ACBD6Q9BR61 282 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SEMA4BQ9NPR2 832 aaPredicted RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 PHPT1Q9NRX4 125 aaPredicted RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 CYP1A1P04798 512 aaPredicted RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 GJA1P17302 382 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 LRRC23Q53EV4 343 aaPredicted RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 SCARA3Q6AZY7 606 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 FAM228AQ86W67 206 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CDK20Q8IZL9 346 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 EFCAB1Q9HAE3 211 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 PRLRP16471 622 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 RGS1Q08116 209 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 LYPLAL1Q5VWZ2 237 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 VITQ6UXI7 678 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
RFFL-201ENST00000315249 GATAD2AQ86YP4 633 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SYT12Q8IV01 421 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 PPP1R14AQ96A00 147 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SEMA4AQ9H3S1 761 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 MC4RP32245 332 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CAP1Q01518 475 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 COMMD2Q86X83 199 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 HMGB4Q8WW32 186 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CD84Q9UIB8 345 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 POLR1DQ9Y2S0 133 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 RGS14O43566 566 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 KLRC4O43908 158 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 CRYMQ14894 314 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 GPR135Q8IZ08 494 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 VIPAS39Q9H9C1 493 aa13.63□□□□□ -0.23
RFFL-201ENST00000315249 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 E9PAM4 449 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 GNSP15586 552 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 KLHL23Q8NBE8 558 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 A0A087X1B8 175 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 VIPP01282 170 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SEC24CP53992 1094 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 NOMO3P69849 1222 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 ANKS1BQ7Z6G8 1248 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 HDAC10Q969S8 669 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 IFNA14P01570 189 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 LMO2P25791 158 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 VEGFBP49765 207 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SP2Q02086 613 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SEZ6LQ9BYH1 1024 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 ATP6V1HQ9UI12 483 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SLC24A2Q9UI40 661 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SIK3Q9Y2K2 1263 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 MAGEC1O60732 1142 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 THRAP10827 490 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 MAD2L1Q13257 205 aaPredicted RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 HDDC3Q8N4P3 179 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SPPL2AQ8TCT8 520 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 NACC2Q96BF6 587 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 TLL2Q9Y6L7 1015 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 LRRC72A6NJI9 287 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 TACR2P21452 398 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 UNC5AQ6ZN44 842 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 GFM2Q969S9 779 aaKnown RBP13.62□□□□□ -0.23
RFFL-201ENST00000315249 FEM1CQ96JP0 617 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 NUMA1Q14980 2115 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 URADA6NGE7 173 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 CCDC154A6NI56 674 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 SLCO1B7G3V0H7 640 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 FFAR3O14843 346 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 UBDO15205 165 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 GPR42O15529 346 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 CYP3A5P20815 502 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 CXCR2P25025 360 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 CCDC81Q6ZN84 652 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 GPR156Q8NFN8 814 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
RFFL-201ENST00000315249 TCF3P15923 654 aa13.61□□□□□ -0.23
RFFL-201ENST00000315249 CAPRIN2Q6IMN6 1127 aaKnown RBP13.61□□□□□ -0.23
RFFL-201ENST00000315249 LRRC8BQ6P9F7 803 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms