RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 APOL2Q9BQE5 337 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CLN6Q9NWW5 311 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 IGSF9Q9P2J2 1179 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF70Q9UC06 446 aaPredicted RBP8.92□□□□□ -0.98
COL6A5-202ENST00000312481 TRPS1Q9UHF7 1281 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 CRYL1Q9Y2S2 319 aa8.92□□□□□ -0.98
COL6A5-202ENST00000312481 PLEKHG6Q3KR16 790 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 HGSNATQ68CP4 663 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SAMD14Q8IZD0 417 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 KLHL23Q8NBE8 558 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 OR6J1Q8NGC5 347 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 HAVCR2Q8TDQ0 301 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CENPNQ96H22 339 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 COX4I2Q96KJ9 171 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 C2orf49Q9BVC5 232 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 FAM126AQ9BYI3 521 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 NOL11Q9H8H0 719 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 HOXC8P31273 242 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MTMR2Q13614 643 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 LPIN1Q14693 890 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PARP15Q460N3 678 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CWF19L1Q69YN2 538 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 RTL3Q8N8U3 475 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ANKRD52Q8NB46 1076 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MPP4Q96JB8 637 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PIN4Q9Y237 131 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 KLHL20Q9Y2M5 609 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SYNJ2BP-COX16A0A087WUM0 186 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ASGR1P07306 291 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PRKAR1AP10644 381 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 RAG1P15918 1043 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ACOT2P49753 483 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ATP13A4Q4VNC1 1196 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 EPC2Q52LR7 807 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ILDR2Q71H61 639 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF554Q86TJ5 538 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 C2orf15Q8WU43 125 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 FAM120BQ96EK7 910 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MLPHQ9BV36 600 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 WDR18Q9BV38 432 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PCDHB12Q9Y5F1 795 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 IRAK3Q9Y616 596 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ANKRD36A6QL64 1941 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 GSC2O15499 205 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TRMUO75648 421 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 GLRA2P23416 452 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SCNN1GP51170 649 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ACTR3P61158 418 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 BIRC8Q96P09 236 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TBL1YQ9BQ87 522 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 KCNN2Q9H2S1 579 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ETNK2Q9NVF9 386 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CRLS1Q9UJA2 301 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PCDHGB1Q9Y5G3 927 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SUPT7LO94864 414 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 AOC1P19801 751 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MOSPD2Q8NHP6 518 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF347Q96SE7 839 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TMEM121Q9BTD3 319 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TMED5Q9Y3A6 229 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TRIP12Q14669 1992 aaPredicted RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 GUCA1CO95843 209 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 COX4I1P13073 169 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 HCAR3P49019 387 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 LGALS3BPQ08380 585 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TAS2R42Q7RTR8 314 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MDM1Q8TC05 714 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 MYO19Q96H55 970 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TRIM8Q9BZR9 551 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 IARS2Q9NSE4 1012 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 PSMD10O75832 226 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 LAMTOR4Q0VGL1 99 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SLC25A52Q3SY17 297 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 AGKQ53H12 422 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF280DQ6N043 979 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ZNF605Q86T29 641 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CPNE9Q8IYJ1 553 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 DCAKDQ8WVC6 231 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 RXFP2Q8WXD0 754 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 RNF157Q96PX1 679 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 TARS2Q9BW92 718 aaKnown RBP8.91□□□□□ -0.98
COL6A5-202ENST00000312481 NLNQ9BYT8 704 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 NUAK2Q9H093 628 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SERHL2Q9H4I8 314 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 CASS4Q9NQ75 786 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 SERHLQ9NQF3 203 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ASTN1O14525 1302 aa8.91□□□□□ -0.98
COL6A5-202ENST00000312481 ITIH1P19827 911 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 PHKG1Q16816 387 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 FAM91A1Q658Y4 838 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 KRT78Q8N1N4 520 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 OR2T34Q8NGX1 318 aa8.9□□□□□ -0.98
COL6A5-202ENST00000312481 OR2T3Q8NH03 318 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms