RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 UPF3AQ9H1J1 476 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 SMARCAD1Q9H4L7 1026 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 PXMP2Q9NR77 195 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 CCDC167Q9P0B6 97 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 AP4E1Q9UPM8 1137 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 CAPN15O75808 1086 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 IL4RP24394 825 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 CDH5P33151 784 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 PGGT1BP53609 377 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 CARTPTQ16568 116 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 DGKDQ16760 1214 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 Q8N9G6 341 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 PCDH19Q8TAB3 1148 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 EFHD2Q96C19 240 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 UNKQ9C0B0 810 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 POLR3FQ9H1D9 316 aaPredicted RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 ZNF385DQ9H6B1 395 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 FANCEQ9HB96 536 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
SPSB4-201ENST00000310546 ATP11BQ9Y2G3 1177 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 RLFQ13129 1914 aa18.25■□□□□ 0.51
SPSB4-201ENST00000310546 MAFGO15525 162 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 CYP2C8P10632 490 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 BMP2P12643 396 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 GP5P40197 560 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 GLRBP48167 497 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 GHRHRQ02643 423 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 CBLBQ13191 982 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 HERC3Q15034 1050 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 DHFR2Q86XF0 187 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 EPHX4Q8IUS5 362 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 SLC4A11Q8NBS3 891 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 GLT1D1Q96MS3 346 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 CTRCQ99895 268 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 SPAG4Q9NPE6 437 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 ERVK-11Q9UQG0 969 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 TRAF6Q9Y4K3 522 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 UBIAD1Q9Y5Z9 338 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 PHIPQ8WWQ0 1821 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 SLC22A2O15244 555 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 ARSAP15289 507 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 PDGFRAP16234 1089 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 PROZP22891 400 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 POLR2IP36954 125 aaKnown RBP18.24■□□□□ 0.51
SPSB4-201ENST00000310546 NKX2-5P52952 324 aaPredicted RBP18.24■□□□□ 0.51
SPSB4-201ENST00000310546 RAD23AP54725 363 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 ARPC4P59998 168 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 ENPEPQ07075 957 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 TBCELQ5QJ74 424 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 CYP4V2Q6ZWL3 525 aaPredicted RBP18.24■□□□□ 0.51
SPSB4-201ENST00000310546 NIF3L1Q9GZT8 377 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 PCDH12Q9NPG4 1184 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
SPSB4-201ENST00000310546 PSMD11O00231 422 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ENDOD1O94919 500 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 RAP1GAPP47736 663 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 GBE1Q04446 702 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 Q3C1V9 767 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 SLC36A3Q495N2 470 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 FSTL4Q6MZW2 842 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 CLIP3Q96DZ5 547 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 RAD21L1Q9H4I0 556 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 NGRNQ9NPE2 291 aaKnown RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 MRPL40Q9NQ50 206 aaKnown RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 OXSMQ9NWU1 459 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TMEM9Q9P0T7 183 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 GABBR1Q9UBS5 961 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 CLDN25C9JDP6 229 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 RGS20O76081 388 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TPSB2P20231 275 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ADSLP30566 484 aaPredicted RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TPSAB1Q15661 275 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 KIZQ2M2Z5 673 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ARL13BQ3SXY8 428 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ERMP1Q7Z2K6 904 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 PIWIL3Q7Z3Z3 882 aaKnown RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 STRA8Q7Z7C7 330 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 DSG4Q86SJ6 1040 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ABHD11Q8NFV4 315 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 CAPSLQ8WWF8 208 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 ZNF347Q96SE7 839 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 UHRF1Q96T88 793 aaPredicted RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TEX13BQ9BXU2 312 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 CACNA2D2Q9NY47 1150 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 PSME2Q9UL46 239 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 OAZ3Q9UMX2 235 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 MAGED2Q9UNF1 606 aaPredicted RBP18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TCAF1Q9Y4C2 921 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 SPO11Q9Y5K1 396 aa18.23■□□□□ 0.51
SPSB4-201ENST00000310546 TRIM64BA6NI03 449 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 LRRIQ4A6NIV6 560 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 C6orf10Q5SRN2 563 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 STEAP4Q687X5 459 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 CYS1Q717R9 158 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 C14orf80Q86SX3 495 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 MFSD2AQ8NA29 543 aa18.22■□□□□ 0.51
SPSB4-201ENST00000310546 PTCD2Q8WV60 388 aaKnown RBP18.22■□□□□ 0.51
SPSB4-201ENST00000310546 ZNF668Q96K58 619 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms