RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LBRQ14739 615 aaKnown RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 MYLK3Q32MK0 819 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 ATP13A4Q4VNC1 1196 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 NCEH1Q6PIU2 408 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 BZW1Q7L1Q6 419 aaKnown RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 PRPF39Q86UA1 669 aaKnown RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 TPCN2Q8NHX9 752 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 KIAA1524Q8TCG1 905 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 EXOC2Q96KP1 924 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 HDAC8Q9BY41 377 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 C6orf106Q9H6K1 298 aaPredicted RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 ATP13A3Q9H7F0 1226 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 PDFQ9HBH1 243 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 SERGEFQ9UGK8 458 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 PILRBQ9UKJ0 227 aa20.12■□□□□ 0.81
VEGFB-201ENST00000309422 CDV3Q9UKY7 258 aaKnown RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.12■□□□□ 0.81
VEGFB-201ENST00000309422 A0A1B0GTW7 788 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 PPP1R12AO14974 1030 aaPredicted RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 MFSD11O43934 449 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 UGT2B4P06133 528 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 CTSLP07711 333 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 NFKBIAP25963 317 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 SERPINA4P29622 427 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 ARSEP51690 589 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 PAFAH1B3Q15102 231 aaKnown RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 SLC45A4Q5BKX6 768 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 PLA2G2CQ5R387 149 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 ATXN7L2Q5T6C5 722 aaPredicted RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 CCDC181Q5TID7 509 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 NCBP2-AS2Q69YL0 99 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 GDPD4Q6W3E5 623 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 CPNE8Q86YQ8 564 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 TMEM139Q8IV31 216 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 SLC41A1Q8IVJ1 513 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 ZCCHC9Q8N567 271 aaKnown RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 RAPGEF5Q92565 580 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 RAB7BQ96AH8 199 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 FAF2Q96CS3 445 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 RNF157Q96PX1 679 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 KLC2Q9H0B6 622 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 ETNK2Q9NVF9 386 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 EVLQ9UI08 416 aaPredicted RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 SARDHQ9UL12 918 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 TFR2Q9UP52 801 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 WASF2Q9Y6W5 498 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 DMDP11532 3685 aa20.11■□□□□ 0.81
VEGFB-201ENST00000309422 ZFHX2Q9C0A1 2572 aaPredicted RBP20.11■□□□□ 0.81
VEGFB-201ENST00000309422 VPS13AQ96RL7 3174 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 BCAT2O15382 392 aaPredicted RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 PJA2O43164 708 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 PLRG1O43660 514 aaKnown RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 ZNF821O75541 412 aaPredicted RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 ZRANB2O95218 330 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■■■ 30
VEGFB-201ENST00000309422 CD160O95971 181 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 CCDC175P0C221 793 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 CD27P26842 260 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 DRD3P35462 400 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 SETMARQ53H47 684 aaPredicted RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 ZNF805Q5CZA5 627 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 MARC1Q5VT66 337 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 ZSCAN30Q86W11 494 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 UBL4BQ8N7F7 174 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 CCNYQ8ND76 341 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 PCDH19Q8TAB3 1148 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 RNF25Q96BH1 459 aaPredicted RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 TUBGCP5Q96RT8 1024 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 EDEM2Q9BV94 578 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 EIF2B4Q9UI10 523 aaKnown RBP20.1■□□□□ 0.81
VEGFB-201ENST00000309422 SLC6A14Q9UN76 642 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 HEY1Q9Y5J3 304 aa20.1■□□□□ 0.81
VEGFB-201ENST00000309422 CCDC66A2RUB6 948 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 PCDH8O95206 1070 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 ADRB3P13945 408 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 GARSP41250 739 aaKnown RBP20.09■□□□□ 0.81
VEGFB-201ENST00000309422 MMP13P45452 471 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 CCR5P51681 352 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 AP1S1P61966 158 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 GALNT2Q10471 571 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 AGBL4Q5VU57 503 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 PEAR1Q5VY43 1037 aaPredicted RBP20.09■□□□□ 0.81
VEGFB-201ENST00000309422 NEK5Q6P3R8 708 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 KATNAL2Q8IYT4 538 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 RCOR2Q8IZ40 523 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 NETO2Q8NC67 525 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 NETO1Q8TDF5 533 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 DNASE2BQ8WZ79 361 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 BIRC7Q96CA5 298 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 PARD6AQ9NPB6 346 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 AMFRQ9UKV5 643 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 REXO2Q9Y3B8 237 aaKnown RBP20.09■□□□□ 0.81
VEGFB-201ENST00000309422 MFHAS1Q9Y4C4 1052 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 TTLL3Q9Y4R7 772 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 PLXND1Q9Y4D7 1925 aa20.09■□□□□ 0.81
VEGFB-201ENST00000309422 SERPINF2P08697 491 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 IL4RP24394 825 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 AFF3P51826 1226 aaKnown RBP20.08■□□□□ 0.81
VEGFB-201ENST00000309422 DYNLT1P63172 113 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 BCL2L1Q07817 233 aa20.08■□□□□ 0.81
VEGFB-201ENST00000309422 PDK1Q15118 436 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms