RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 CHRNA4P43681 627 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 RPL14P50914 215 aaKnown RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 RENBPP51606 427 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 MPP1Q00013 466 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 NAB1Q13506 487 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 AGKQ53H12 422 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 RARS2Q5T160 578 aaKnown RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 ZNF554Q86TJ5 538 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 LDB1Q86U70 411 aaPredicted RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 ZNF184Q99676 751 aaPredicted RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 RBBP8Q99708 897 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 PAAF1Q9BRP4 392 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
MUC4-201ENST00000308466 PNPLA8Q9NP80 782 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 CCDC167Q9P0B6 97 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 DSEQ9UL01 958 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 AURKCQ9UQB9 309 aa10.84□□□□□ -0.67
MUC4-201ENST00000308466 GREB1LQ9C091 1923 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 FOCADQ5VW36 1801 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 NDUFS3O75489 264 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 WFS1O76024 890 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 COX4I1P13073 169 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 AFF1P51825 1210 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 LIMK2P53671 638 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 GRB14Q14449 540 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 BNC2Q6ZN30 1099 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 HPS6Q86YV9 775 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ATP6V0D2Q8N8Y2 350 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 EURLQ9NYK6 297 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 SLC27A5Q9Y2P5 690 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ANGPTL3Q9Y5C1 460 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 NCF1BA6NI72 391 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 NCF1CA8MVU1 366 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 E5RI56 91 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 MAGEB3O15480 346 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 TPST1O60507 370 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ALDOAP04075 364 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 NCF1P14598 390 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 RAG1P15918 1043 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 OR1E1P30953 314 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 CYTH1Q15438 398 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 CNPY1Q3B7I2 92 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ARL13AQ5H913 290 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 RAP1GAP2Q684P5 730 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 PCDH20Q8N6Y1 951 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 UTP4Q969X6 686 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 EME1Q96AY2 570 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 NXNL1Q96CM4 212 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 MIPEPQ99797 713 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 POMKQ9H5K3 350 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ZNF212Q9UDV6 495 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ITM2BQ9Y287 266 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 HDAC3O15379 428 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 TM7SF2O76062 418 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 CHRNGP07510 517 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 SLC2A3P11169 496 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 KCNE1P15382 129 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 GLUD2P49448 558 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 WNT3AP56704 352 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 MRPS22P82650 360 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 LDLRAD1Q5T700 205 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 PLD6Q8N2A8 252 aaKnown RBP10.83□□□□□ -0.68
MUC4-201ENST00000308466 LZTR1Q8N653 840 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 ATAD1Q8NBU5 361 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 TEKT5Q96M29 485 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 GBA3Q9H227 469 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 GLOD4Q9HC38 313 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 IGSF9Q9P2J2 1179 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
MUC4-201ENST00000308466 KIAA1217Q5T5P2 1943 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 SNX2O60749 519 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 RAMP2O60895 175 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
MUC4-201ENST00000308466 ETV4P43268 484 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 TAZQ16635 292 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 QSER1Q2KHR3 1735 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 DCLRE1AQ6PJP8 1040 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 GPRIN1Q7Z2K8 1008 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
MUC4-201ENST00000308466 GIPC2Q8TF65 315 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 KHSRPQ92945 711 aaKnown RBP eCLIP10.82□□□□□ -0.68
MUC4-201ENST00000308466 ENTPD7Q9NQZ7 604 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 GIT1Q9Y2X7 761 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 DTNAQ9Y4J8 743 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 SUPT3HB4E1H0 165 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 RHOBTB1O94844 696 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 CHEK2O96017 543 aa10.82□□□□□ -0.68
MUC4-201ENST00000308466 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
MUC4-201ENST00000308466 EIF2B2P49770 351 aaKnown RBP10.82□□□□□ -0.68
MUC4-201ENST00000308466 IDH3AP50213 366 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms