RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GDAP1Q8TB36 358 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 ARRDC2Q8TBH0 407 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
TRIM40-205ENST00000307859 TCF25Q9BQ70 676 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 FSD1LQ9BXM9 530 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 ARNT2Q9HBZ2 717 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 TBC1D30Q9Y2I9 924 aa12.05□□□□□ -0.48
TRIM40-205ENST00000307859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 A0A0D9SEW6 157 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 KDELR3O43731 214 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PMPCBO75439 489 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PYGBP11216 843 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PFKLP17858 780 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 HDCP19113 662 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GABRR2P28476 465 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CTNNB1P35222 781 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GP5P40197 560 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ERVFC1P60507 584 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 SLC7A9P82251 487 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 DSC2Q02487 901 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 IHHQ14623 411 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PCID2Q5JVF3 399 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TXNDC8Q6A555 127 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PKN3Q6P5Z2 889 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 POTEHQ6S545 545 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CPLX4Q7Z7G2 160 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TAX1BP1Q86VP1 789 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF354CQ86Y25 554 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ARL14EPQ8N8R7 260 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 OR7D4Q8NG98 312 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TCP10LQ8TDR4 215 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 MRPS31Q92665 395 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 MFSD3Q96ES6 412 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CPNE1Q99829 537 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ACE2Q9BYF1 805 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CHRAC1Q9NRG0 131 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 SMPD4Q9NXE4 827 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZFATQ9P243 1243 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 SLC17A6Q9P2U8 582 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PRKAG3Q9UGI9 489 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GGA2Q9UJY4 613 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GRID1Q9ULK0 1009 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 RWDD3Q9Y3V2 267 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 MYOFQ9NZM1 2061 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 C2orf71A6NGG8 1288 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 EBAG9O00559 213 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 LPXNO60711 386 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 GLUD1P00367 558 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 RHOCP08134 193 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 DHRS4L1P0CG22 281 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ERVK-10P10266 1014 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TAC1P20366 129 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 NMBRP28336 390 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 FOXN2P32314 431 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ETFBP38117 255 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CD86P42081 329 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ETV4P43268 484 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 MAXP61244 160 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZXDBP98169 803 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CYP4F8P98187 520 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 UBE3AQ05086 875 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF177Q13360 481 aaPredicted RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 BMPR2Q13873 1038 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PDK4Q16654 411 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CXorf57Q6NSI4 855 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF783Q6ZMS7 281 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 RTL10Q7L3V2 364 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 MRPL43Q8N983 215 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TGS1Q96RS0 853 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CYP2S1Q96SQ9 504 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 POLR1EQ9GZS1 481 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 NSRP1Q9H0G5 558 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 ALG13Q9NP73 1137 aaKnown RBP12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 TCAF1Q9Y4C2 921 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 PSAT1Q9Y617 370 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 CPQQ9Y646 472 aa12.04□□□□□ -0.48
TRIM40-205ENST00000307859 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 C1RP00736 705 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 DNAJB1P25685 340 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 CDC25CP30307 473 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 CHRNA4P43681 627 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 OXCT1P55809 520 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 ZNF235Q14590 738 aa12.03□□□□□ -0.48
TRIM40-205ENST00000307859 RFTN1Q14699 578 aaPredicted RBP12.03□□□□□ -0.48
TRIM40-205ENST00000307859 SLC14A2Q15849 920 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms