RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 FAM220AQ7Z4H9 259 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 NLRP14Q86W24 1093 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 LGI2Q8N0V4 545 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 EIF1ADQ8N9N8 165 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 KCNN2Q9H2S1 579 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 FOXN1O15353 648 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GLRA3O75311 464 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PRNPP04156 253 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC25A52Q3SY17 297 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PRPF39Q86UA1 669 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GAS2L3Q86XJ1 694 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 DSELQ8IZU8 1212 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PCM1Q15154 2024 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 LYNP07948 512 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 WARSP23381 471 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 NTSP30990 170 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 USP4Q13107 963 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 MPP3Q13368 585 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT73Q86Y46 540 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GATAD2AQ86YP4 633 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 FNIP1Q8TF40 1166 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ASZ1Q8WWH4 475 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 HDHD2Q9H0R4 259 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RERGLQ9H628 205 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RBM7Q9Y580 266 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC88CQ9P219 2028 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 THSD7AQ9UPZ6 1657 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 KPNA3O00505 521 aaPredicted RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 AP3D1O14617 1153 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CASP4P49662 377 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GPR15P49685 360 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GPM6BQ13491 265 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 LRRC14Q15048 493 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PEX5LQ8IYB4 626 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ALG13Q9NP73 1137 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RBPJLQ9UBG7 517 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ICE1Q9Y2F5 2266 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 MIA3Q5JRA6 1907 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 B2RBV5 119 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PSMD4P55036 377 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CBFBQ13951 182 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CBWD3Q5JTY5 395 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CBWD5Q5RIA9 395 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PTCD2Q8WV60 388 aaKnown RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CLEC4DQ8WXI8 215 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 CHP1Q99653 195 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 TKTL2Q9H0I9 626 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 OR12D3Q9UGF7 316 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 LRRC10BA6NIK2 292 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PMM2O15305 246 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 IL6P05231 212 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ANXA5P08758 320 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GGCXP38435 758 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 STAT5AP42229 794 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 PSMD7P51665 324 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RHAGQ02094 409 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF792Q3KQV3 632 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 AGBL2Q5U5Z8 902 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RFX8Q6ZV50 586 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 C7orf57Q8NEG2 295 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC35C1Q96A29 364 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 RERGQ96A58 199 aaPredicted RBP8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ZFP14Q9HCL3 533 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 GNPTGQ9UJJ9 305 aa8.42□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF682O95780 498 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 DLGAP3O95886 979 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 COILP38432 576 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 SKIV2L2P42285 1042 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TM4SF4P48230 202 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 RRP1BQ14684 758 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 DDR2Q16832 855 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PLPP4Q5VZY2 271 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TRIQKQ629K1 86 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PDPK2PQ6A1A2 396 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM131BQ86XD5 332 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 HTR3CQ8WXA8 447 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 DPY30Q9C005 99 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 RRAGDQ9NQL2 400 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC24A2Q9UI40 661 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 APC2O95996 2303 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 KRT34O76011 436 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 COX7A2P14406 83 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 COPAP53621 1224 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ILDR2Q71H61 639 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 SH3BP5LQ7L8J4 393 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 OTOP2Q7RTS6 562 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CHPFQ8IZ52 775 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ATG16L2Q8NAA4 619 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PPP1R10Q96QC0 940 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CYP1A1P04798 512 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 MAGEA9P43362 315 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ERVK-21P61565 698 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC153Q494R4 210 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 BHLHB9Q6PI77 547 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 GLT6D1Q7Z4J2 308 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms