RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TBC1D3BA6NDS4 549 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 BIRC5O15392 142 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 HSPA14Q0VDF9 509 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 BST1Q10588 318 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 TUSC3Q13454 348 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 PSMD5Q16401 504 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 FAM187BQ17R55 369 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 YTHDF3Q7Z739 585 aaKnown RBP16.1■□□□□ 0.17
USP42-201ENST00000306177 MON1AQ86VX9 555 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 TMEM199Q8N511 208 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 SETD9Q8NE22 299 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 ATL1Q8WXF7 558 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 PRCCQ92733 491 aaPredicted RBP16.1■□□□□ 0.17
USP42-201ENST00000306177 ROGDIQ9GZN7 287 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 SNX6Q9UNH7 406 aa16.1■□□□□ 0.17
USP42-201ENST00000306177 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 FAM20BO75063 409 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 KCNH1O95259 989 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 COX7A2P14406 83 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 CCL23P55773 120 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 SQLEQ14534 574 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PIWIL4Q7Z3Z4 852 aaKnown RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 CACUL1Q86Y37 369 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PWWP2AQ96N64 755 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 QRFPRQ96P65 431 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 APOL4Q9BPW4 351 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 EPN2O95208 641 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 TNNI3P19429 210 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 CES1P23141 567 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 PPP1R15BQ5SWA1 713 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PEX1O43933 1283 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 CILPO75339 1184 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 ANXA6P08133 673 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 HSMCR30P0CW71 290 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 LYPLAL1Q5VWZ2 237 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 EXOC3L1Q86VI1 746 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 ZSCAN18Q8TBC5 510 aaPredicted RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 KCTD4Q8WVF5 259 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 NDNQ99608 321 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 TM6SF2Q9BZW4 377 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 HS6ST1O60243 411 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 TLR5O60602 858 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PEX10O60683 326 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 UNC5CO95185 931 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 TNFAIP8O95379 198 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 CLTBP09497 229 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PIK3R1P27986 724 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 BRCC3P46736 316 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PKNOX1P55347 436 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 SDHAF4Q5VUM1 108 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 POTEHQ6S545 545 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 FCRL2Q96LA5 508 aaPredicted RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 CORO1BQ9BR76 489 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 ACE2Q9BYF1 805 aaPredicted RBP16.09■□□□□ 0.17
USP42-201ENST00000306177 RERGLQ9H628 205 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 FBXO10Q9UK96 956 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 EFR3BQ9Y2G0 817 aa16.09■□□□□ 0.17
USP42-201ENST00000306177 PSMG1O95456 288 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 DLGAP3O95886 979 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 GUCA1AP43080 201 aaPredicted RBP16.08■□□□□ 0.17
USP42-201ENST00000306177 CASP12Q6UXS9 341 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 FUKQ8N0W3 1084 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 SVOPQ8N4V2 548 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.17
USP42-201ENST00000306177 CXorf40AQ8TE69 158 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 MTFMTQ96DP5 389 aaKnown RBP16.08■□□□□ 0.17
USP42-201ENST00000306177 P2RY11Q96G91 374 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 MBOAT7Q96N66 472 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 CACNA1FO60840 1977 aa16.08■□□□□ 0.17
USP42-201ENST00000306177 SMIM28A0A1B0GU29 152 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 CDK18Q07002 472 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 PTPRNQ16849 979 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 XYLT1Q86Y38 959 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 LRRN4Q8WUT4 740 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 UBE2E3Q969T4 207 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 FAM47E-STBD1D6RA91 191 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 CD3EAPO15446 510 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 GUCY1B2O75343 617 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 PARNO95453 639 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 ADH1AP07327 375 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 PSMB9P28065 219 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 ICAM3P32942 547 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 HK2P52789 917 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 ELF3P78545 371 aaPredicted RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 NOMO1Q15155 1222 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 NLGN2Q8NFZ4 835 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 DHX33Q9H6R0 707 aaKnown RBP16.08■□□□□ 0.16
USP42-201ENST00000306177 BPIFA1Q9NP55 256 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 PALMDQ9NP74 551 aa16.08■□□□□ 0.16
USP42-201ENST00000306177 TMEM216Q9P0N5 145 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms