RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ACSM2BQ68CK6 577 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.24
TRIM56-201ENST00000306085 DLG3Q92796 817 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 APBB2Q92870 758 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 SEMA4BQ9NPR2 832 aaPredicted RBP13.52□□□□□ -0.24
TRIM56-201ENST00000306085 LHCGRP22888 699 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 TXNL4AP83876 142 aaKnown RBP13.52□□□□□ -0.24
TRIM56-201ENST00000306085 TDRPQ86YL5 185 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 OR2L8Q8NGY9 312 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 DMRTB1Q96MA1 342 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 TMEM51Q9NW97 253 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 VPS4AQ9UN37 437 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 B3GAT3O94766 335 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 DNASE1L1P49184 302 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 EPHB3P54753 998 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 BNIP2Q12982 314 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 CELF6Q96J87 481 aaKnown RBP13.52□□□□□ -0.24
TRIM56-201ENST00000306085 FBXL21Q9UKT6 434 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 IFNGP01579 166 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 SQLEQ14534 574 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 CES3Q6UWW8 571 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 TEX19Q8NA77 164 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 DIRAS2Q96HU8 199 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 TFPIP10646 304 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 CTSEP14091 401 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 PAGE2BQ5JRK9 111 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 CCDC163A0A0D9SF12 145 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 ZBTB14O43829 449 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 TNK2Q07912 1038 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 ABCA11PQ4W5N1 156 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 TCP10LQ8TDR4 215 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 NADKO95544 446 aaPredicted RBP13.52□□□□□ -0.25
TRIM56-201ENST00000306085 EGFRP00533 1210 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 CST1P01037 141 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 CYP2C9P11712 490 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 TUBG1P23258 451 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 SP140Q13342 867 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 GXYLT1Q4G148 440 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 GPR156Q8NFN8 814 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 MND1Q9BWT6 205 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 ELP3Q9H9T3 547 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 KCND2Q9NZV8 630 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 KLQ9UEF7 1012 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 DNTTP04053 509 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 HOXC12P31275 282 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 NECTIN1Q15223 517 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 C3orf18Q9UK00 162 aa13.52□□□□□ -0.25
TRIM56-201ENST00000306085 C5orf51A6NDU8 294 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 KLRC1P26715 233 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 GNALP38405 381 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SMIM11AP58511 58 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TOR1AIP1Q5JTV8 583 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 TP53INP1Q96A56 240 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 APBA2Q99767 749 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 PTDSS1P48651 473 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 RPL6Q02878 288 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 LCN1P1Q5VSP4 162 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FOXR1Q6PIV2 292 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ARAP3Q8WWN8 1544 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SLC12A8A0AV02 714 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 BTBD19C9JJ37 291 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 EPHA7Q15375 998 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ZBTB6Q15916 424 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 USP41Q3LFD5 358 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FAM91A1Q658Y4 838 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 SLC25A25Q6KCM7 469 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FBXW8Q8N3Y1 598 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 C1QTNF7Q9BXJ2 289 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 PSME2Q9UL46 239 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 XKRYO14609 159 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 NCAM2O15394 837 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 IGFALSP35858 605 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ADAM8P78325 824 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF563Q8TA94 476 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 EIF3KQ9UBQ5 218 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 MAU2Q9Y6X3 613 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 MYH13Q9UKX3 1938 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 CYB561D2O14569 222 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ZYG11AQ6WRX3 759 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FRRS1Q6ZNA5 592 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 KCNS3Q9BQ31 491 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 OR1I1O60431 355 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ASMTP46597 345 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FNDC3BQ53EP0 1204 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 FSTL5Q8N475 847 aaPredicted RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 PCDH20Q8N6Y1 951 aaKnown RBP13.51□□□□□ -0.25
TRIM56-201ENST00000306085 MAGEC3Q8TD91 643 aa13.51□□□□□ -0.25
TRIM56-201ENST00000306085 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms