RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ENTPD1P49961 510 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CCT8P50990 548 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 TKTL1P51854 596 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 NR1H2P55055 460 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 BASP1P80723 227 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 BST2Q10589 180 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 TTLL4Q14679 1199 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SETMARQ53H47 684 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 CYBRD1Q53TN4 286 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SPANXN3Q5MJ09 141 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PPP1R26Q5T8A7 1209 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 INTS11Q5TA45 600 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM72AQ5TYM5 149 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 MANEALQ5VSG8 457 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 KIAA0319Q5VV43 1072 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 C9orf57Q5W0N0 161 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PM20D1Q6GTS8 502 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM72DQ6L9T8 149 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM45BPQ6NSW5 357 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM72BQ86X60 149 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CRLF3Q8IUI8 442 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 C12orf29Q8N999 325 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 KCTD6Q8NC69 237 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 FAM45AQ8TCE6 357 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 HM13Q8TCT9 377 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 RSPH1Q8WYR4 309 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 MFSD3Q96ES6 412 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 CLMNQ96JQ2 1002 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 ZMAT2Q96NC0 199 aaKnown RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 GBP5Q96PP8 586 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 GDF15Q99988 308 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 PSD2Q9BQI7 771 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 DNAI2Q9GZS0 605 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 WDR55Q9H6Y2 383 aaPredicted RBP5.53□□□□□ -1.52
VPS50-202ENST00000305866 SMOXQ9NWM0 555 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 EPS15L1Q9UBC2 864 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 SFMBT1Q9UHJ3 866 aa5.53□□□□□ -1.52
VPS50-202ENST00000305866 E7ENX8 843 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 BOLA2-SMG1P6H3BVE0 249 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 NRP1O14786 923 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 CREB3O43889 395 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 DLX3O60479 287 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 KRT37O76014 449 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 SEC14L2O76054 403 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 TNFAIP8O95379 198 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PEX11BO96011 259 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 F2P00734 622 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 INHBAP08476 426 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 GPX3P22352 226 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 IGFBP6P24592 240 aaPredicted RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 CYP2F1P24903 491 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 MSX2P35548 267 aaPredicted RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 SERPINB5P36952 375 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 RANBP1P43487 201 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 GALK1P51570 392 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 DNAJB13P59910 316 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PPIDQ08752 370 aaKnown RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 GALNT1Q10472 559 aaPredicted RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 TRAP1Q12931 704 aaKnown RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 CCDC153Q494R4 210 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PPP6R3Q5H9R7 873 aaPredicted RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 ZFP1Q6P2D0 407 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 ISLR2Q6UXK2 745 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 CNTD1Q8N815 330 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 OR13F1Q8NGS4 319 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 NLRP7Q8WX94 980 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 RSAD2Q8WXG1 361 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 FERMT1Q9BQL6 677 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 ADPGKQ9BRR6 497 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 B3GNT5Q9BYG0 378 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 IQCGQ9H095 443 aaKnown RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 TREX1Q9NSU2 369 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 CACNA2D2Q9NY47 1150 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 NXF1Q9UBU9 619 aaKnown RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 PCSK1NQ9UHG2 260 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PCDHA9Q9Y5H5 950 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PCM1Q15154 2024 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 MAGEB16A2A368 324 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 MOXD2PA6NHM9 499 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 TMEM233B4DJY2 109 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 SNAI1O95863 264 aaPredicted RBP5.52□□□□□ -1.53
VPS50-202ENST00000305866 CLPTM1O96005 669 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 ITGB3P05106 788 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 NCAM1P13591 858 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 KCNC1P48547 511 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 BCAT1P54687 386 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 LPIN1Q14693 890 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 Q3C1V9 767 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 MMEL1Q495T6 779 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 DUSP28Q4G0W2 176 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 GRTP1Q5TC63 336 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 LGSNQ5TDP6 509 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 LAIR1Q6GTX8 287 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 TBPL2Q6SJ96 375 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 KCNT2Q6UVM3 1135 aa5.52□□□□□ -1.53
VPS50-202ENST00000305866 USP50Q70EL3 339 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms