RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CRLF3Q8IUI8 442 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 BBS5Q8N3I7 341 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 RFWD2Q8NHY2 731 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 PEX13Q92968 403 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 ZNF778Q96MU6 729 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 TUBB6Q9BUF5 446 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 KCNK13Q9HB14 408 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 CYP4F11Q9HBI6 524 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 A0A096LPK6 155 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 GJB5O95377 273 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 SERPINE1P05121 402 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 URODP06132 367 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 SLC6A4P31645 630 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 CD86P42081 329 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 OVGP1Q12889 678 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 RFTN1Q14699 578 aaPredicted RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 PCLAFQ15004 111 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 ESRP1Q6NXG1 681 aaKnown RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 ASRGL1Q7L266 308 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 LMNTD2Q8IXW0 634 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 TCEAL8Q8IYN2 117 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 C2CD4AQ8NCU7 369 aaPredicted RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 CALML6Q8TD86 181 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 MYEOVQ96EZ4 313 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 THOC1Q96FV9 657 aaKnown RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 ZNF333Q96JL9 665 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 FEM1CQ96JP0 617 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 KLHL5Q96PQ7 755 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 KLF16Q9BXK1 252 aaPredicted RBP19.66■□□□□ 0.74
HOXC4-201ENST00000303406 STOML2Q9UJZ1 356 aa19.66■□□□□ 0.74
HOXC4-201ENST00000303406 MYLKQ15746 1914 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 CENPFP49454 3210 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 H3BNC9 293 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 STC2O76061 302 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 C2P06681 752 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 FGF3P11487 239 aaPredicted RBP19.65■□□□□ 0.74
HOXC4-201ENST00000303406 HLA-DPA1P20036 260 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 ARNTP27540 789 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 PPM1AP35813 382 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 ACVRL1P37023 503 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 DSC2Q02487 901 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 GNA12Q03113 381 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 ITKQ08881 620 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 THOC5Q13769 683 aaKnown RBP19.65■□□□□ 0.74
HOXC4-201ENST00000303406 TSTD2Q5T7W7 516 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 C16orf46Q6P387 395 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 CMC1Q7Z7K0 106 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 SETD3Q86TU7 594 aaPredicted RBP19.65■□□□□ 0.74
HOXC4-201ENST00000303406 CIR1Q86X95 450 aaPredicted RBP19.65■□□□□ 0.74
HOXC4-201ENST00000303406 ZNF354CQ86Y25 554 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 PGBD5Q8N414 524 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 RDH11Q8TC12 318 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 TMEM120AQ9BXJ8 343 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 TMEM216Q9P0N5 145 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 COPG2Q9UBF2 871 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 RIMKLBQ9ULI2 386 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 MIA3Q5JRA6 1907 aa19.65■□□□□ 0.74
HOXC4-201ENST00000303406 ILVBLA1L0T0 632 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 H2AFYO75367 372 aaKnown RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 BAIAP3O94812 1187 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 VAPBO95292 243 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 TOP3BO95985 862 aaKnown RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 TIMP1P01033 207 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 HOXD9P28356 352 aaPredicted RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 PRKAA2P54646 552 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF235Q14590 738 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 GRM3Q14832 879 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 PPM1JQ5JR12 505 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ZNF783Q6ZMS7 281 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 OR6Y1Q8NGX8 325 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 PPP1R14CQ8TAE6 165 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 DIS3LQ8TF46 1054 aaKnown RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 INPP5DQ92835 1189 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 SKA1Q96BD8 255 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 FAM96AQ9H5X1 160 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 STN1Q9H668 368 aaKnown RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ARHGEF3Q9NR81 526 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ZFP69BQ9UJL9 534 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 DCTN4Q9UJW0 460 aa19.64■□□□□ 0.73
HOXC4-201ENST00000303406 MRPL42Q9Y6G3 142 aaKnown RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 ZFP37Q9Y6Q3 630 aaPredicted RBP19.64■□□□□ 0.73
HOXC4-201ENST00000303406 A0A0G2JND7 137 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 KIAA0355O15063 1070 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 KDELR3O43731 214 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 AHSGP02765 367 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 FGF1P05230 155 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 ATXN1LP0C7T5 689 aaKnown RBP19.63■□□□□ 0.73
HOXC4-201ENST00000303406 NQO1P15559 274 aaKnown RBP19.63■□□□□ 0.73
HOXC4-201ENST00000303406 CES1P23141 567 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 ELF1P32519 619 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 ETFBP38117 255 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 CHRNA4P43681 627 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 RASSF2P50749 326 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 MAXP61244 160 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 WDR5P61964 334 aaKnown RBP19.63■□□□□ 0.73
HOXC4-201ENST00000303406 PLD1Q13393 1074 aa19.63■□□□□ 0.73
HOXC4-201ENST00000303406 TAF12Q16514 161 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms