RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 C10orf120Q5SQS8 335 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 MIER2Q8N344 545 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 NRG4Q8WWG1 115 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ZNF778Q96MU6 729 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 SLC39A3Q9BRY0 314 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TNPO2O14787 897 aaKnown RBP14.22□□□□□ -0.13
SDC2-201ENST00000302190 TREHO43280 583 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 NDUFS3O75489 264 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 RHOBTB1O94844 696 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ZNF23P17027 643 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TARBP2Q15633 366 aaKnown RBP14.22□□□□□ -0.13
SDC2-201ENST00000302190 NCBP2-AS2Q69YL0 99 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 C16orf87Q6PH81 154 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ANGPTL8Q6UXH0 198 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 RELL1Q8IUW5 271 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 PIGVQ9NUD9 493 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 MORF4L1Q9UBU8 362 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TMCO1Q9UM00 188 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 KIAA1217Q5T5P2 1943 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 RGSL1A5PLK6 1076 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 FAM58BPP0C7Q3 252 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 IRF1P10914 325 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 PFKFB4Q16877 469 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 TNFAIP8L3Q5GJ75 292 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 LINC00523Q86TU6 105 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 PQLC1Q8N2U9 271 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 FBXW8Q8N3Y1 598 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 ARHGAP39Q9C0H5 1083 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 MID1IP1Q9NPA3 183 aa14.22□□□□□ -0.13
SDC2-201ENST00000302190 AAR2Q9Y312 384 aaKnown RBP14.22□□□□□ -0.13
SDC2-201ENST00000302190 RRN3P2A6NIE6 340 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 MTSS1O43312 755 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 MAGEC1O60732 1142 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 OR6B1O95007 311 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 HDCP19113 662 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 CYP3A5P20815 502 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 CHN2P52757 468 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SEMA5AQ13591 1074 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 LIN52Q52LA3 116 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SFT2D3Q587I9 215 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 TBCELQ5QJ74 424 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 TMTC4Q5T4D3 741 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 LRRC8BQ6P9F7 803 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 CXCL17Q6UXB2 119 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 ZDHHC17Q8IUH5 632 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 DNAJB14Q8TBM8 379 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 QKIQ96PU8 341 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■■■□□ 14.9
SDC2-201ENST00000302190 APOL5Q9BWW9 433 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SSU72Q9NP77 194 aaKnown RBP14.21□□□□□ -0.13
SDC2-201ENST00000302190 MYH9P35579 1960 aaKnown RBP14.21□□□□□ -0.13
SDC2-201ENST00000302190 TRPC5OSA6NMA1 111 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 MDM4O15151 490 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 LRIG2O94898 1065 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 MTX3Q5HYI7 312 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SLC26A9Q7LBE3 791 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 PCYOX1LQ8NBM8 494 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SHKBP1Q8TBC3 707 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 HSFY1Q96LI6 401 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 HAUS8Q9BT25 410 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 SEMA4BQ9NPR2 832 aaPredicted RBP14.21□□□□□ -0.13
SDC2-201ENST00000302190 KANSL3Q9P2N6 904 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 FBXO5Q9UKT4 447 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 PHF24Q9UPV7 400 aa14.21□□□□□ -0.13
SDC2-201ENST00000302190 PSMD12O00232 456 aaPredicted RBP14.21□□□□□ -0.14
SDC2-201ENST00000302190 GCATO75600 419 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 XRCC1P18887 633 aaPredicted RBP14.21□□□□□ -0.14
SDC2-201ENST00000302190 MAPRE2Q15555 327 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 NEDD8Q15843 81 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 CCL14Q16627 93 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 ESAMQ96AP7 390 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 CATSPERBQ9H7T0 1116 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 BAG5Q9UL15 447 aa14.21□□□□□ -0.14
SDC2-201ENST00000302190 HEATR9A2RTY3 570 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 FAM72CH0Y354 149 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 KATNA1O75449 491 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 TIPRLO75663 272 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 MPOP05164 745 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 SMIM10L2AP0DMW4 78 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 SMIM10L2BP0DMW5 78 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 TSHRP16473 764 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 EEF1DP29692 281 aaKnown RBP14.2□□□□□ -0.14
SDC2-201ENST00000302190 GRM5P41594 1212 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 CD86P42081 329 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 CCNG1P51959 295 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 THOP1P52888 689 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 CAPRIN1Q14444 709 aaKnown RBP14.2□□□□□ -0.14
SDC2-201ENST00000302190 KCTD21Q4G0X4 260 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 CCDC92Q53HC0 331 aaPredicted RBP14.2□□□□□ -0.14
SDC2-201ENST00000302190 FAM72AQ5TYM5 149 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 FAM72DQ6L9T8 149 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 TLK2Q86UE8 772 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 FAM72BQ86X60 149 aa14.2□□□□□ -0.14
SDC2-201ENST00000302190 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
SDC2-201ENST00000302190 FSTL5Q8N475 847 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms