RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 KCNA10Q16322 511 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 ERICH5Q6P6B1 374 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 NEK7Q8TDX7 302 aa12.48□□□□□ -0.41
ABCA3-201ENST00000301732 MRPS31Q92665 395 aaKnown RBP12.48□□□□□ -0.41
ABCA3-201ENST00000301732 CLDN5O00501 218 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 NRLP54845 237 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 FRG1Q14331 258 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 AP2A2O94973 939 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RTN3O95197 1032 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 HGFP14210 728 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RAP1GAP2Q684P5 730 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 ANKS1BQ7Z6G8 1248 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 LNX2Q8N448 690 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 NKD1Q969G9 470 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RIT2Q99578 217 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 DUSP9Q99956 384 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 NYAP2Q9P242 653 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SERPINF2P08697 491 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 BST2Q10589 180 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 KLF1Q13351 362 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 AUHQ13825 339 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SAMD4BQ5PRF9 694 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 DHDDSQ86SQ9 333 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 S100A6P06703 90 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 ANXA11P50995 505 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 EEF1AKMT1Q8WVE0 214 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 LGMNQ99538 433 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 FUCA2Q9BTY2 467 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 ZNF304Q9HCX3 659 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 DRG1Q9Y295 367 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SAMHD1Q9Y3Z3 626 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 EML1O00423 815 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 GTF2A2P52657 109 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 HUNKP57058 714 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 NAA20P61599 178 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SNAP47Q5SQN1 464 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RPTNQ6XPR3 784 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 GPR65Q8IYL9 337 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 FAM81AQ8TBF8 368 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 STOML2Q9UJZ1 356 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 CDK12Q9NYV4 1490 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RGS14O43566 566 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 RABGGTBP53611 331 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 DNASE1L3Q13609 305 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 PREPLQ4J6C6 727 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 BROXQ5VW32 411 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 MZT2BQ6NZ67 158 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 STN1Q9H668 368 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 KCND2Q9NZV8 630 aa12.47□□□□□ -0.41
ABCA3-201ENST00000301732 POLR3HQ9Y535 204 aaPredicted RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 OAS3Q9Y6K5 1087 aaKnown RBP12.47□□□□□ -0.41
ABCA3-201ENST00000301732 USP42Q9H9J4 1324 aaKnown RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 CCL22O00626 93 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 DYRK3O43781 588 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 CLPXO76031 633 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 UNC5CO95185 931 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 SLC26A3P40879 764 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 OMPP47874 163 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 CDKAL1Q5VV42 579 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 SYT15Q9BQS2 421 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 CATSPERZQ9NTU4 200 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 MTRF1O75570 445 aaKnown RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 ACSM2AQ08AH3 577 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 C6orf183Q5T699 404 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 ACSM2BQ68CK6 577 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.41
ABCA3-201ENST00000301732 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 TRPM5Q9NZQ8 1165 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 ARHGAP28Q9P2N2 729 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 HPSEQ9Y251 543 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 TFEBP19484 476 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 SPIRE1Q08AE8 756 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 ABRAXAS1Q6UWZ7 409 aa12.46□□□□□ -0.41
ABCA3-201ENST00000301732 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms