RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 TBC1D3LB9A6J9 549 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 WNT9AO14904 365 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 MUSKO15146 869 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 PIGNO95427 931 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 GSRP00390 522 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 KRT1P04264 644 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 UGT2B4P06133 528 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 KRT7P08729 469 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 TBC1D3HP0C7X1 549 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 KDELR1P24390 212 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 MAT2AP31153 395 aaKnown RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 MAPK8P45983 427 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 MARCKSL1P49006 195 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 SNRPD1P62314 119 aaKnown RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 LLGL1Q15334 1064 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 INO80DQ53TQ3 878 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 TBC1D3GQ6DHY5 549 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 TBC1D3CQ6IPX1 549 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 TBC1D3Q8IZP1 549 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 C1orf216Q8TAB5 229 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 GDAP1L1Q96MZ0 367 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 TRIM10Q9UDY6 481 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 LRRC72A6NJI9 287 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 C3orf70A6NLC5 250 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 PLRG1O43660 514 aaKnown RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 SPOPO43791 374 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 ENGP17813 658 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 GBE1Q04446 702 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 DUOXA1Q1HG43 343 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 LZTR1Q8N653 840 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 KLK6Q92876 244 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 RNF25Q96BH1 459 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 NSMCE3Q96MG7 304 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 SLC6A18Q96N87 628 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 ZNF670Q9BS34 389 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 CAPN10Q9HC96 672 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 DYRK4Q9NR20 520 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 DONSONQ9NYP3 566 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 RCOR3Q9P2K3 495 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-201ENST00000301717 LCMT1Q9UIC8 334 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 ITM2BQ9Y287 266 aa18.49■□□□□ 0.55
SPSB3-201ENST00000301717 CXorf51AA0A1B0GTR3 108 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 C10orf142B7Z368 130 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 MAFKO60675 156 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 PALMO75781 387 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 IGSF6O95976 241 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 PEX11BO96011 259 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 ITIH2P19823 946 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 ABL2P42684 1182 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 IL10RBQ08334 325 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 SLC10A7Q0GE19 358 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 SFSWAPQ12872 951 aaKnown RBP18.48■□□□□ 0.55
SPSB3-201ENST00000301717 PDK2Q15119 407 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 SLC23A3Q6PIS1 610 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
SPSB3-201ENST00000301717 FAF2Q96CS3 445 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 KLHL32Q96NJ5 620 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 GTPBP2Q9BX10 602 aaKnown RBP18.48■□□□□ 0.55
SPSB3-201ENST00000301717 TM9SF3Q9HD45 589 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 GGT7Q9UJ14 662 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 SLC6A14Q9UN76 642 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 ALG6Q9Y672 507 aa18.48■□□□□ 0.55
SPSB3-201ENST00000301717 C16orf96A6NNT2 1141 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 C4orf47A7E2U8 309 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 CDX4O14627 284 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 BCAT2O15382 392 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 POP4O95707 220 aaKnown RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 SERPINF2P08697 491 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 ITGB7P26010 798 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 HADHBP55084 474 aaKnown RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 BNC1Q01954 994 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 SLC10A2Q12908 348 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 STPG1Q5TH74 334 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 PLPP6Q8IY26 295 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 ATPAF2Q8N5M1 289 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 TPCN2Q8NHX9 752 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 CINPQ9BW66 212 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 NUSAP1Q9BXS6 441 aaKnown RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 PCED1AQ9H1Q7 454 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 CDV3Q9UKY7 258 aaKnown RBP18.47■□□□□ 0.55
SPSB3-201ENST00000301717 CA5BQ9Y2D0 317 aa18.47■□□□□ 0.55
SPSB3-201ENST00000301717 A0A0A6YYK5 440 aaPredicted RBP18.46■□□□□ 0.55
SPSB3-201ENST00000301717 A0A1B0GTW7 788 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 A0A1B0GVT2 93 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 SLC7A4O43246 635 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 SPINT1O43278 529 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 RNGTTO60942 597 aaKnown RBP18.46■□□□□ 0.55
SPSB3-201ENST00000301717 IPO7O95373 1038 aaKnown RBP18.46■□□□□ 0.55
SPSB3-201ENST00000301717 ADRB3P13945 408 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 PRLRP16471 622 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 CD27P26842 260 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 SERPINB6P35237 376 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 HOXD12P35452 270 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 SLC1A1P43005 524 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 ID4P47928 161 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 CSNK1EP49674 416 aaKnown RBP18.46■□□□□ 0.55
SPSB3-201ENST00000301717 NEK3P51956 506 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 VAV2P52735 878 aa18.46■□□□□ 0.55
SPSB3-201ENST00000301717 LBRQ14739 615 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms