RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 NEPROQ6NW34 567 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MOB2Q70IA6 237 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CFAP52Q8N1V2 620 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NDRG1Q92597 394 aaKnown RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LGMNQ99538 433 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RNF208Q9H0X6 261 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ELL3Q9HB65 397 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 LIASO43766 372 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CCNB1P14635 433 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GPR1P46091 355 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SEMA5AQ13591 1074 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SNAP47Q5SQN1 464 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KATNAL2Q8IYT4 538 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DNAJC1Q96KC8 554 aaKnown RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FERD3LQ96RJ6 166 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CAPN15O75808 1086 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IRAK1BP1Q5VVH5 260 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GINS4Q9BRT9 223 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MLPHQ9BV36 600 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EME2A4GXA9 379 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KPNA6O60684 536 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IRF8Q02556 426 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 XKR6Q5GH73 641 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PERM1Q5SV97 790 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FNBP1LQ5T0N5 605 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 STXBP5Q5T5C0 1151 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 S100A13Q99584 98 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PDE2AO00408 941 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NRG1Q02297 640 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PCID2Q5JVF3 399 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CRTC3Q6UUV7 619 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FAM151BQ6UXP7 276 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C8orf59Q8N0T1 100 aaPredicted RBP13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MOSPD2Q8NHP6 518 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 STK32AQ8WU08 396 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 WNT8BQ93098 351 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PGM3O95394 542 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CYP1A1P04798 512 aaPredicted RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IL12RB1P42701 662 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RBBP4Q09028 425 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IL17AQ16552 155 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CDH24Q86UP0 819 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CLEC4MQ9H2X3 399 aaPredicted RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ASTN1O14525 1302 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 GSAPA4D1B5 854 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RCCD1A6NED2 376 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TMEM191CA6NGB0 347 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 IL1BP01584 269 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C4BPBP20851 252 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MAPKAPK2P49137 400 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 AMIGO2Q86SJ2 522 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OFCC1Q8IZS5 231 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ASB7Q9H672 318 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EGFL7Q9UHF1 273 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VPS51Q9UID3 782 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KLF15Q9UIH9 416 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ACSL4O60488 711 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NDUFS2O75306 463 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 VPS4BO75351 444 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 KRT36O76013 467 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 BMP10O95393 424 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DBTP11182 482 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 TFEBP19484 476 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RPL22P35268 128 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 THOP1P52888 689 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SAMD4BQ5PRF9 694 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C10orf107Q8IVU9 208 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 CLHC1Q8NHS4 586 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 EPS8L1Q8TE68 723 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 UXTQ9UBK9 157 aaPredicted RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 C15orf41Q9Y2V0 281 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PNMA8CA0A1B0GUJ8 204 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 E7ENQ6 273 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 XYLBO75191 536 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 COX4I1P13073 169 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PORCNQ9H237 461 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NDUFA13Q9P0J0 144 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 OR10H2O60403 315 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 NPR3P17342 541 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 SPIBQ01892 262 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 DEF8Q6ZN54 512 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 ARHGAP36Q6ZRI8 547 aa13.69□□□□□ -0.22
CHRFAM7A-201ENST00000299847 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms