RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 BBS2Q9BXC9 721 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 UTP6Q9NYH9 597 aaKnown RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 NCF1BA6NI72 391 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 NCF1CA8MVU1 366 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 PIGNO95427 931 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 NCF1P14598 390 aaPredicted RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 CHI3L2Q15782 390 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 RABGAP1LQ5R372 815 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 KIF2BQ8N4N8 673 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 SLC39A13Q96H72 371 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 ZSWIM3Q96MP5 696 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 RILPQ96NA2 401 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 RAD9AQ99638 391 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 TLE6Q9H808 572 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 OLA1Q9NTK5 396 aaKnown RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.36
TTC17-202ENST00000299240 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.36
TTC17-202ENST00000299240 BPTFQ12830 3046 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 FGF10O15520 208 aaPredicted RBP12.77□□□□□ -0.37
TTC17-202ENST00000299240 CCR10P46092 362 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 SCAPQ12770 1279 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 MPP3Q13368 585 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 IHHQ14623 411 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 CEP128Q6ZU80 1094 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 CCDC121Q6ZUS5 278 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 ADGRD2Q7Z7M1 963 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
TTC17-202ENST00000299240 PGBD5Q8N414 524 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
TTC17-202ENST00000299240 FAM129AQ9BZQ8 928 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 RCOR3Q9P2K3 495 aaPredicted RBP12.77□□□□□ -0.37
TTC17-202ENST00000299240 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 STK38LQ9Y2H1 464 aa12.77□□□□□ -0.37
TTC17-202ENST00000299240 INSIG1O15503 277 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ARSDP51689 593 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 SLC5A9Q2M3M2 681 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 N4BP2L1Q5TBK1 243 aaPredicted RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 NUDCD3Q8IVD9 361 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 PCDHA11Q9Y5I1 949 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 NCAM2O15394 837 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 IGFBP4P22692 258 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 PPM1AP35813 382 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 FASTKD1Q53R41 847 aaKnown RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 TTC39BQ5VTQ0 682 aaPredicted RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 LRRC8BQ6P9F7 803 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ARCQ7LC44 396 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 SLC44A1Q8WWI5 657 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 CNOT10Q9H9A5 744 aaKnown RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 USP34Q70CQ2 3546 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 LINC01553A4QN01 128 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ANXA9O76027 345 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 RHOP08100 348 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 FAM163BP0C2L3 166 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 CPA2P48052 419 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 TNK2Q07912 1038 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 RCN2Q14257 317 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 ZRANB3Q5FWF4 1079 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
TTC17-202ENST00000299240 PACS1Q6VY07 963 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 GORASP1Q9BQQ3 440 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 CIDEBQ9UHD4 219 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
TTC17-202ENST00000299240 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 NEMP1O14524 444 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 HAUS5O94927 633 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 ITGA2BP08514 1039 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 SERPINF2P08697 491 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 PGAM1P18669 254 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CD70P32970 193 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 BMPR1AP36894 532 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 PSEN1P49768 467 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CDKN1CP49918 316 aaPredicted RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
TTC17-202ENST00000299240 GPM6BQ13491 265 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CSHL1Q14406 222 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 SKIV2LQ15477 1246 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 GEN1Q17RS7 908 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 RARS2Q5T160 578 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 CNSTQ6PJW8 725 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 ARID3BQ8IVW6 561 aaPredicted RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 ITFG1Q8TB96 612 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
TTC17-202ENST00000299240 MRGPRX2Q96LB1 330 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 CD84Q9UIB8 345 aa12.75□□□□□ -0.37
TTC17-202ENST00000299240 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms