RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 HLA-DQB2P05538 268 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CCNCP24863 283 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PAPOLAP51003 745 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TAS2R39P59534 338 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 RAB10P61026 200 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PRKAA1Q13131 559 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CYLC2Q14093 348 aaPredicted RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 UPP1Q16831 310 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 ZNF423Q2M1K9 1284 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 GRAMD1BQ3KR37 738 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 LINC00523Q86TU6 105 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 ATPAF2Q8N5M1 289 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 KYQ8NBH2 561 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TXNDC5Q8NBS9 432 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 FCRL5Q96RD9 977 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 STK39Q9UEW8 545 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 F8W810 466 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PAGE1O75459 146 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 ENO3P13929 434 aaPredicted RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 HNRNPLP14866 589 aaKnown RBP eCLIP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 HOXC8P31273 242 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 ADRA1AP35348 466 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 HADHAP40939 763 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CPT1AP50416 773 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 EIF4EBP2Q13542 120 aaPredicted RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 RBM20Q5T481 1227 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CNSTQ6PJW8 725 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CNTN4Q8IWV2 1026 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 OR10T2Q8NGX3 314 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 RP9Q8TA86 221 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 HEXDCQ8WVB3 486 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 ELMO2Q96JJ3 720 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 IL12RB2Q99665 862 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 NPAS2Q99743 824 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 TRPV6Q9H1D0 765 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 OSBPL2Q9H1P3 480 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 SPATS2LQ9NUQ6 558 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 MPP6Q9NZW5 540 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 MID2Q9UJV3 735 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 CDYLQ9Y232 598 aa13.79□□□□□ -0.2
BCCIP-202ENST00000299130 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 COPG1Q9Y678 874 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 NYNRINQ9P2P1 1898 aaKnown RBP13.79□□□□□ -0.2
BCCIP-202ENST00000299130 POMCP01189 267 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 STMN1P16949 149 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 KCNA5P22460 613 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 MED21Q13503 144 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PIGGQ5H8A4 983 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 OGFRL1Q5TC84 451 aaPredicted RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 FAM171BQ6P995 826 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 NDNQ99608 321 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 ARHGEF38Q9NXL2 777 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 NSMCE4AQ9NXX6 385 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PCDHGB4Q9UN71 923 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 TCAF1Q9Y4C2 921 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PCDHGB5Q9Y5G0 923 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 COL4A4P53420 1690 aaPredicted RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 TXNDC9O14530 226 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 ZNF189O75820 626 aaPredicted RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 CHRNA1P02708 482 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 COG7P83436 770 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 SEPT6Q14141 434 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PCSK7Q16549 785 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 MMEL1Q495T6 779 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 ZNF470Q6ECI4 717 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 BNC2Q6ZN30 1099 aaPredicted RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 C14orf80Q86SX3 495 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 FAM156AQ8NDB6 213 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 IRGQQ8WZA9 623 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 CASP10Q92851 521 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PKMYT1Q99640 499 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 AP5M1Q9H0R1 490 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 ZBTB26Q9HCK0 441 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 RBM22Q9NW64 420 aaKnown RBP eCLIP13.78□□□□□ -0.2
BCCIP-202ENST00000299130 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
BCCIP-202ENST00000299130 MTF2Q9Y483 593 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms