RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TYW5A2RUC4 315 aaKnown RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 LEFTY2O00292 366 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 SCAMP3O14828 347 aaKnown RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 PRPF4O43172 522 aaKnown RBP eCLIP15.76■□□□□ 0.11
LSM6-201ENST00000296581 ATP9BO43861 1147 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 FAM155BO75949 473 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 LUC7L3O95232 432 aaKnown RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 TPH1P17752 444 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 CD86P42081 329 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 ITKQ08881 620 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 ZNF235Q14590 738 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 IHHQ14623 411 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 RFTN1Q14699 578 aaPredicted RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 ANKRD20A4Q4UJ75 823 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 ARMC3Q5W041 872 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 ZNF669Q96BR6 464 aaPredicted RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 TCEAL4Q96EI5 215 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 SMC6Q96SB8 1091 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 SPON2Q9BUD6 331 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 FSD1LQ9BXM9 530 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 KIF9Q9HAQ2 790 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 KCNK9Q9NPC2 374 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 UBA2Q9UBT2 640 aaPredicted RBP15.76■□□□□ 0.11
LSM6-201ENST00000296581 MYLKQ15746 1914 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 ATG2AQ2TAZ0 1938 aa15.76■□□□□ 0.11
LSM6-201ENST00000296581 MUSKO15146 869 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 RHOP08100 348 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 MGAT5Q09328 741 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 PCID2Q5JVF3 399 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 GPR158Q5T848 1215 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 RNF219Q5W0B1 726 aaPredicted RBP15.75■□□□□ 0.11
LSM6-201ENST00000296581 POTEHQ6S545 545 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 BBS5Q8N3I7 341 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 OTUD6BQ8N6M0 293 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
LSM6-201ENST00000296581 CDKL2Q92772 493 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 CERS2Q96G23 380 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 KLC4Q9NSK0 619 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 ZDHHC7Q9NXF8 308 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 SEPT3Q9UH03 358 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 SMG5Q9UPR3 1016 aaKnown RBP15.75■□□□□ 0.11
LSM6-201ENST00000296581 YBX2Q9Y2T7 364 aaKnown RBP15.75■□□□□ 0.11
LSM6-201ENST00000296581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.75■□□□□ 0.11
LSM6-201ENST00000296581 UGT1A9O60656 530 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 XYLBO75191 536 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 GLDCP23378 1020 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 SLC14A2Q15849 920 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 MPP7Q5T2T1 576 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 RNF43Q68DV7 783 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 CES3Q6UWW8 571 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 BBS7Q8IWZ6 715 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 PSKH2Q96QS6 385 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 MGME1Q9BQP7 344 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 CCDC134Q9H6E4 229 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 TASP1Q9H6P5 420 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 UGT1A7Q9HAW7 530 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 UGT1A10Q9HAW8 530 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 UGT1A8Q9HAW9 530 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 MRM3Q9HC36 420 aaKnown RBP15.75■□□□□ 0.11
LSM6-201ENST00000296581 CHRAC1Q9NRG0 131 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 HAUS2Q9NVX0 235 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 DPP7Q9UHL4 492 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 OR51B4Q9Y5P0 310 aa15.75■□□□□ 0.11
LSM6-201ENST00000296581 FAM47DPA6NHR8 397 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 H0Y626 953 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 TYROBPO43914 113 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 KRT37O76014 449 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 KIAA0754O94854 1291 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 SERPINB9P50453 376 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 TEAD2Q15562 447 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 ARHGAP15Q53QZ3 475 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 FSCBQ5H9T9 825 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 PRSS36Q5K4E3 855 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 LGSNQ5TDP6 509 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 CMTM8Q8IZV2 173 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 CARNMT1Q8N4J0 409 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 TDRD5Q8NAT2 981 aaKnown RBP15.74■□□□□ 0.11
LSM6-201ENST00000296581 PTCD2Q8WV60 388 aaKnown RBP15.74■□□□□ 0.11
LSM6-201ENST00000296581 SEMA3CQ99985 751 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 MUC3BQ9H195 1237 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 EPN3Q9H201 632 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 E2F8A0AVK6 867 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 SNRPAP09012 282 aaKnown RBP15.74■□□□□ 0.11
LSM6-201ENST00000296581 KRT4P19013 534 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 PCSK7Q16549 785 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 SLC5A9Q2M3M2 681 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 PKN3Q6P5Z2 889 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 SH2D5Q6ZV89 423 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 C4orf33Q8N1A6 199 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 DENND1AQ8TEH3 1009 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 ALKBH8Q96BT7 664 aaKnown RBP15.74■□□□□ 0.11
LSM6-201ENST00000296581 MFSD3Q96ES6 412 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 PRKD2Q9BZL6 878 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 SMG9Q9H0W8 520 aaKnown RBP15.74■□□□□ 0.11
LSM6-201ENST00000296581 PRKAG3Q9UGI9 489 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 HCFC2Q9Y5Z7 792 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 ACTL7AQ9Y615 435 aa15.74■□□□□ 0.11
LSM6-201ENST00000296581 LOC285095A0A1B0GVY8 99 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms