RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 DSG3P32926 999 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 GPR15P49685 360 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 RPL7AP62424 266 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 FSCN1Q16658 493 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 SYT12Q8IV01 421 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ANKRD13AQ8IZ07 590 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CLYBLQ8N0X4 340 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TMEM161BQ8NDZ6 487 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 PORCNQ9H237 461 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 PNPLA8Q9NP80 782 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CLN6Q9NWW5 311 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 XPR1Q9UBH6 696 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 MAGEL2Q9UJ55 1249 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 IKZF3Q9UKT9 509 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 SPATA31A1Q5TZJ5 1347 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TMEM150BA6NC51 233 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CBX4O00257 560 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 FGF10O15520 208 aaPredicted RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 NRP2O60462 931 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 HOXD10P28358 340 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TBX4P57082 545 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 STX4Q12846 297 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ZACNQ401N2 412 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CHMP1BQ7LBR1 199 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 GLT6D1Q7Z4J2 308 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 C10orf53Q8N6V4 93 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CDK5RAP1Q96SZ6 601 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 CRYL1Q9Y2S2 319 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 GRIN2DO15399 1336 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 PIAS1O75925 651 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ERBB2P04626 1255 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 VEGFAP15692 232 aaPredicted RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ZNF12P17014 697 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 FMO4P31512 558 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 GRK3P35626 688 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ACSM2AQ08AH3 577 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ZSWIM7Q19AV6 140 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ACSM2BQ68CK6 577 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 OFCC1Q8IZS5 231 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 HSFY1Q96LI6 401 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 QKIQ96PU8 341 aaKnown RBP eCLIP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 PANX3Q96QZ0 392 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 FAM126AQ9BYI3 521 aaPredicted RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 FBXO44Q9H4M3 255 aa11.14□□□□□ -0.63
PBRM1-201ENST00000296302 RPRD1BQ9NQG5 326 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 WBP11Q9Y2W2 641 aaKnown RBP11.14□□□□□ -0.63
PBRM1-201ENST00000296302 ERCC6L2Q5T890 1561 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 H3BMM5 538 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 NOL4O94818 638 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 GSTM5P46439 218 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 PTP4A2Q12974 167 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 USP4Q13107 963 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SLCO6A1Q86UG4 719 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 HIPK1Q86Z02 1210 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 HERC6Q8IVU3 1022 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 PGAM4Q8N0Y7 254 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 KLHL1Q9NR64 748 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SNX8Q9Y5X2 465 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 CALCAP01258 141 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 CDK9P50750 372 aaKnown RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 HIRAP54198 1017 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 FAM183BPQ6ZVS7 135 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 MCFD2Q8NI22 146 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 NKD2Q969F2 451 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 CLPTM1LQ96KA5 538 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 ARMC7Q9H6L4 198 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 NOL11Q9H8H0 719 aaKnown RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 ZNF180Q9UJW8 692 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 ING4Q9UNL4 249 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SIN3BO75182 1162 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 NPR3P17342 541 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 RAB25P57735 213 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 EIF3MQ7L2H7 374 aaKnown RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 CARNMT1Q8N4J0 409 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 SENP6Q9GZR1 1112 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 TKTL2Q9H0I9 626 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
PBRM1-201ENST00000296302 ZSCAN32Q9NX65 697 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 RPS6KB2Q9UBS0 482 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 CNTNAP2Q9UHC6 1331 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 AZIN1O14977 448 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 TMCC2O75069 709 aa11.13□□□□□ -0.63
PBRM1-201ENST00000296302 COX7A2P14406 83 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms