RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CENPLQ8N0S6 344 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC26A7Q8TE54 656 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZNF333Q96JL9 665 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 FCRL5Q96RD9 977 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 TCF7L2Q9NQB0 619 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 OXSMQ9NWU1 459 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 STX18Q9P2W9 335 aaKnown RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ACOT9Q9Y305 439 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 GJB3O75712 270 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 JUNP05412 331 aaKnown RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 STMN1P16949 149 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ATP6V1C1P21283 382 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 CD86P42081 329 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC12A2P55011 1212 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 TAS2R39P59534 338 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 CDK18Q07002 472 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ALFQ53S48 1182 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 RBM20Q5T481 1227 aaKnown RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 IL31Q6EBC2 164 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 CNSTQ6PJW8 725 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 PPFIBP2Q8ND30 876 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 ISL2Q96A47 359 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 HMCESQ96FZ2 354 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 SIKE1Q9BRV8 207 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 NYNRINQ9P2P1 1898 aaKnown RBP16■□□□□ 0.15
NCKIPSD-201ENST00000294129 MYO16Q9Y6X6 1858 aa16■□□□□ 0.15
NCKIPSD-201ENST00000294129 IGHA2P01877 340 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SBK3P0C264 359 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 GEMP55040 296 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC10A7Q0GE19 358 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SLC12A1Q13621 1099 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 BLMHQ13867 455 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CSHL1Q14406 222 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TMC7Q7Z402 723 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 NET1Q7Z628 596 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 PTAR1Q7Z6K3 402 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 HPS6Q86YV9 775 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 RTL3Q8N8U3 475 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SH3TC2Q8TF17 1288 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 UCMAQ8WVF2 138 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 FAM136AQ96C01 138 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 IL12RB2Q99665 862 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZDHHC2Q9UIJ5 367 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TCAF1Q9Y4C2 921 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 MKI67P46013 3256 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 FGF10O15520 208 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CAPN15O75808 1086 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZNF135P52742 658 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ATXN3P54252 364 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 DSC2Q02487 901 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 DLG1Q12959 904 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TRMT5Q32P41 509 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ANO7Q6IWH7 933 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 LRRC8EQ6NSJ5 796 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 LMNTD2Q8IXW0 634 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 KBTBD2Q8IY47 623 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 OR6P1Q8NGX9 317 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CATSPER2Q96P56 530 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TSGA13Q96PP4 275 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 HCSTQ9UBK5 93 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 MAP3K7O43318 606 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ANPEPP15144 967 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CYP2C18P33260 490 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 PBX3P40426 434 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TBX4P57082 545 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 ACTR3P61158 418 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CLLU1OSQ5K130 101 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 LIPMQ5VYY2 423 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 RAP1GAP2Q684P5 730 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 CMTM5Q96DZ9 223 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 FAM193BQ96PV7 902 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 TRIM62Q9BVG3 475 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 C1QTNF1Q9BXJ1 281 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SP110Q9HB58 689 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 SSX2IPQ9Y2D8 614 aa15.99■□□□□ 0.15
NCKIPSD-201ENST00000294129 PDE4DIPQ5VU43 2346 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 TADA2AO75478 443 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 LUC7L3O95232 432 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 HNRNPLP14866 589 aaKnown RBP eCLIP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 ARSAP15289 507 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 RAB10P61026 200 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 KLF10Q13118 480 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 ZYG11AQ6WRX3 759 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 PSMG2Q969U7 264 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 SERPINB11Q96P15 392 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 YIPF3Q9GZM5 350 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 NOL6Q9H6R4 1146 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 FBXO5Q9UKT4 447 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 MTF2Q9Y483 593 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 OR51F1A6NGY5 319 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 PSMD3O43242 534 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 DLX3O60479 287 aa15.98■□□□□ 0.15
NCKIPSD-201ENST00000294129 COX4I1P13073 169 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms