RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PLA2G5P39877 138 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 METAP1P53582 386 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 RPL6Q02878 288 aaKnown RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 RAD51Q06609 339 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 PPIDQ08752 370 aaKnown RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 GRM3Q14832 879 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 ATXN7L2Q5T6C5 722 aaPredicted RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 BBS12Q6ZW61 710 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 BZW1Q7L1Q6 419 aaKnown RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 BBS5Q8N3I7 341 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 HDDC3Q8N4P3 179 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 TSEN2Q8NCE0 465 aaKnown RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 ZNF419Q96HQ0 510 aaPredicted RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 PPP1R16AQ96I34 528 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 ALS2CR12Q96Q35 445 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 OSBPL1AQ9BXW6 950 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 BRD8Q9H0E9 1235 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 PACSIN2Q9UNF0 486 aaPredicted RBP27.29■■□□□ 1.96
SSU72-201ENST00000291386 HEY1Q9Y5J3 304 aa27.29■■□□□ 1.96
SSU72-201ENST00000291386 MYO15AQ9UKN7 3530 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 TNRC6BQ9UPQ9 1833 aaKnown RBP27.28■■□□□ 1.96
SSU72-201ENST00000291386 RNF103O00237 685 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 RNASEH2AO75792 299 aaKnown RBP27.28■■□□□ 1.96
SSU72-201ENST00000291386 MAP3K6O95382 1288 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 ACSL1P33121 698 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 DYNLT1P63172 113 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 ADCY2Q08462 1091 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 PDK1Q15118 436 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 MARC1Q5VT66 337 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 KAZNQ674X7 775 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 RYBPQ8N488 228 aaPredicted RBP27.28■■□□□ 1.96
SSU72-201ENST00000291386 TRIM58Q8NG06 486 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 GRIN3AQ8TCU5 1115 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 GANCQ8TET4 914 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 ARRDC3Q96B67 414 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 FAM122AQ96E09 287 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 HDAC8Q9BY41 377 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 ZDHHC6Q9H6R6 413 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 NUMA1Q14980 2115 aa27.28■■□□□ 1.96
SSU72-201ENST00000291386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 C10orf142B7Z368 130 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 KPNA3O00505 521 aaPredicted RBP27.27■■□□□ 1.96
SSU72-201ENST00000291386 KRIT1O00522 736 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 ZSCAN12O43309 604 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 EPN2O95208 641 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 PYGMP11217 842 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 ITGB7P26010 798 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 CETN2P41208 172 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 CCDC15Q0P6D6 951 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 LPAL2Q16609 132 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 MEI1Q5TIA1 1274 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 NPNTQ6UXI9 565 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 FAM124AQ86V42 546 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 CCDC13Q8IYE1 715 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 TMEFF1Q8IYR6 380 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 OR6K2Q8NGY2 324 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 FOXJ1Q92949 421 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 GPR174Q9BXC1 333 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 OSBPL8Q9BZF1 889 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 AMACRQ9UHK6 382 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 EVLQ9UI08 416 aaPredicted RBP27.27■■□□□ 1.96
SSU72-201ENST00000291386 PCDHGA5Q9Y5G8 931 aa27.27■■□□□ 1.96
SSU72-201ENST00000291386 PPP1R12AO14974 1030 aaPredicted RBP27.26■■□□□ 1.95
SSU72-201ENST00000291386 MUSKO15146 869 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 RETP07949 1114 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 MMP13P45452 471 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 RGRP47804 291 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 CNTN1Q12860 1018 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 ZNF235Q14590 738 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 AGBL4Q5VU57 503 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 ASCL5Q7RTU5 278 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 SRLQ86TD4 932 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 REXO1L1PQ8IX06 675 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 EXOC2Q96KP1 924 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 TUBGCP5Q96RT8 1024 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 MGME1Q9BQP7 344 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 KDM4CQ9H3R0 1056 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 DYRK4Q9NR20 520 aa27.26■■□□□ 1.95
SSU72-201ENST00000291386 APOC4-APOC2K7ER74 178 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 SEMA4FO95754 770 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 APOC2P02655 101 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 CR2P20023 1033 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 GKP32189 559 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 MAPK8P45983 427 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 LLGL1Q15334 1064 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 ZNF805Q5CZA5 627 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 RALGPS1Q5JS13 557 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 GDPD4Q6W3E5 623 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.25■■□□□ 1.95
SSU72-201ENST00000291386 ERN2Q76MJ5 926 aaKnown RBP27.25■■□□□ 1.95
SSU72-201ENST00000291386 SLC41A1Q8IVJ1 513 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 PGBD5Q8N414 524 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 CCNYQ8ND76 341 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 HCAR2Q8TDS4 363 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 P3H4Q92791 437 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 LGMNQ99538 433 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 GMEB2Q9UKD1 530 aa27.25■■□□□ 1.95
SSU72-201ENST00000291386 OTOGLQ3ZCN5 2332 aa27.24■■□□□ 1.95
SSU72-201ENST00000291386 METTL12A8MUP2 240 aa27.24■■□□□ 1.95
SSU72-201ENST00000291386 INSIG1O15503 277 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms