RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 RMDN1Q96DB5 314 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 SPACA7Q96KW9 195 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 GPR174Q9BXC1 333 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 CATSPERBQ9H7T0 1116 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 NCDNQ9UBB6 729 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 LHX3Q9UBR4 397 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 SLC25A13Q9UJS0 675 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 GMEB2Q9UKD1 530 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 RAB23Q9ULC3 237 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 PCDHA13Q9Y5I0 950 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.32□□□□□ -0.92
HMGN1-201ENST00000288344 ADAMTS9Q9P2N4 1935 aa9.32□□□□□ -0.92
HMGN1-201ENST00000288344 A0A0A6YYK5 440 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 A0A1W2PP55 124 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LNP1A1A4G5 178 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ZSCAN5CA6NGD5 496 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 SOWAHDA6NJG2 315 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 BTNL10A8MVZ5 291 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ZNF487B1APH4 448 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 EEF2KO00418 725 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PLK4O00444 970 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 WNT9AO14904 365 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 MUSKO15146 869 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 SLC7A4O43246 635 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PLRG1O43660 514 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 BUB1BO60566 1050 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 MAFKO60675 156 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 NDUFA10O95299 355 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 SEMA4FO95754 770 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CR2P20023 1033 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 MAGEA1P43355 309 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 RGRP47804 291 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CSNK1DP48730 415 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CCR5P51681 352 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ADPRHP54922 357 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TPI1P60174 286 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CREB5Q02930 508 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 NSUN2Q08J23 767 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CNTN1Q12860 1018 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PAFAH1B3Q15102 231 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 MYLK3Q32MK0 819 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DCAF12L1Q5VU92 463 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LYSMD4Q5XG99 296 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 VSIG1Q86XK7 387 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TMTC1Q8IUR5 882 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 RHOT2Q8IXI1 618 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 HDDC3Q8N4P3 179 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LZTR1Q8N653 840 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TEX26Q8N6G2 289 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CASKIN2Q8WXE0 1202 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CTNNBL1Q8WYA6 563 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 OR8D1Q8WZ84 308 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 FOXJ1Q92949 421 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 HSPA12BQ96MM6 686 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 HDAC8Q9BY41 377 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CPEB1Q9BZB8 566 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 BTBD1Q9H0C5 482 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TNKS2Q9H2K2 1166 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CTTNBP2NLQ9P2B4 639 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 IMPACTQ9P2X3 320 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LCMT1Q9UIC8 334 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PCDHB9Q9Y5E1 797 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DUSP10Q9Y6W6 482 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TRPM6Q9BX84 2022 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 A0A0U1RQJ8 604 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 A0A1W2PR77 199 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 AREL1O15033 823 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 FOXD2O60548 495 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LEFTY1O75610 366 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TMCC1O94876 653 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 POP4O95707 220 aaKnown RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 GSRP00390 522 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DNTTP04053 509 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 SERPINF2P08697 491 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 TPM1P09493 284 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 KDELR1P24390 212 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 GKP32189 559 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DHPSP49366 369 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CCNHP51946 323 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PDK2Q15119 407 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 ACCSLQ4AC99 568 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 KIAA0895LQ68EN5 471 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 NCBP2-AS2Q69YL0 99 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 NCEH1Q6PIU2 408 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 LEKR1Q6ZMV7 388 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 CBARPQ8N350 705 aaPredicted RBP9.31□□□□□ -0.92
HMGN1-201ENST00000288344 PGBD5Q8N414 524 aa9.31□□□□□ -0.92
HMGN1-201ENST00000288344 OR2AP1Q8NGE2 309 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms